PDB Entry (1lqd) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 1lqd | Resolution: 2.7 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 12061878 | DOI: 10.1021/jm0111346 | |
Protein |
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Protein Name: Coagulation factor X | |
Protein Class: HYDROLASE | |
Uniprot ID/ACC: P00742 (FA10_HUMAN) | Organism: Homo sapiens |
Gene Symbol: F10 | Gene ID: 2159 |
Pocket Descriptors | |
Volume: 553.28 | Depth: 19.5714 |
Hydrophobicity: 0.664804 | Drug Score: 0.342943 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: 1-(3-CARBAMIMIDOYL-BENZYL)-4-METHYL-1H-INDOLE-2-CARBOXYLIC ACID 3,5-DIMETHYL-BENZYLAMIDE | ||
HET ID: CMI | PubChem: 446984 | |
DrugBank: - | ChEMBL: CHEMBL93087 | |
Canonical SMILES: Cc1cc(CNC(=O)c2cc3c(n2Cc2cccc(c2)C(=N)N)cccc3C)cc(c1)C | ||
Standard InChI: InChI=1S/C27H28N4O/c1-17-10-18(2)12-21(11-17)15-30-27(32)25-14-23-19(3)6-4-9-24(23)31(25)16-20-7-5-8-22(13-20)26(28)29/h4-14H,15-16H2,1-3H3,(H3,28,29)(H,30,32) | ||
Molecular Formula: C27H28N4O | Mol. Weight: 424.5374 | Heavy Atoms: 32 |
Charge: 0 | Is Chiral: False | logP: 6.0198 |
HBD: 3 | HBA: 5 | TPSA: 83.9 |
#Bonds: 35 | #Rotatable Bonds: 7 | Shape Complexity: 0.18518518 |
Stereocomplexity: 0.0 | Ligand Type: Small Molecule |
Binding Affinity |
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Database Name | Value |
PDBBind | Ki : 9 nM |
BindingDB | Ki : 9 nM |