PDB Entry (1lqd)

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PDB ID: 1lqd Resolution: 2.7 Å Exp. Method: X-RAY DIFFRACTION
PMID: 12061878 DOI: 10.1021/jm0111346
Protein
Protein Name: Coagulation factor X
Protein Class: HYDROLASE
Uniprot ID/ACC: P00742 (FA10_HUMAN) Organism: Homo sapiens
Gene Symbol: F10 Gene ID: 2159
Pocket Descriptors
Volume: 553.28 Depth: 19.5714
Hydrophobicity: 0.664804 Drug Score: 0.342943
Pocket Similarity: Calculate
Ligand
Ligand Name:   1-(3-CARBAMIMIDOYL-BENZYL)-4-METHYL-1H-INDOLE-2-CARBOXYLIC ACID 3,5-DIMETHYL-BENZYLAMIDE
HET ID:   CMI PubChem:   446984
DrugBank:   - ChEMBL:   CHEMBL93087
Canonical SMILES:   Cc1cc(CNC(=O)c2cc3c(n2Cc2cccc(c2)C(=N)N)cccc3C)cc(c1)C
Standard InChI:   InChI=1S/C27H28N4O/c1-17-10-18(2)12-21(11-17)15-30-27(32)25-14-23-19(3)6-4-9-24(23)31(25)16-20-7-5-8-22(13-20)26(28)29/h4-14H,15-16H2,1-3H3,(H3,28,29)(H,30,32)
Molecular Formula:   C27H28N4O Mol. Weight:   424.5374 Heavy Atoms:   32
Charge:   0 Is Chiral:   False logP:   6.0198
HBD:   3 HBA:   5 TPSA:   83.9
#Bonds:   35 #Rotatable Bonds:   7 Shape Complexity:   0.18518518
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
Database Name Value
PDBBind Ki : 9 nM
BindingDB Ki : 9 nM