PDB Entry (6ete) Download |
||
Visualizer: MichelaNGLo |
||
PDB ID: 6ete | Resolution: 1.47 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: - | DOI: None | |
Protein |
|
Protein Name: Lysine-specific demethylase 4D | |
Protein Class: TRANSCRIPTION REGULATOR | |
Uniprot ID/ACC: Q6B0I6 (KDM4D_HUMAN) | Organism: Homo sapiens |
Gene Symbol: KDM4D | Gene ID: 55693 |
Pocket Descriptors | |
Volume: 946.496 | Depth: 19.4772 |
Hydrophobicity: 0.660099 | Drug Score: 0.631473 |
Pocket Similarity: Calculate |
Ligand |
||
Ligand Name: [2-(1-methyl-1,2,3,4-tetrazol-4-ium-5-yl)ethanoylamino]azanium | ||
HET ID: BWK | PubChem: 137332070 | |
DrugBank: - | ChEMBL: - | |
Canonical SMILES: [NH3+]NC(=O)Cc1[nH+]nnn1C | ||
Standard InChI: InChI=1S/C4H8N6O/c1-10-3(7-8-9-10)2-4(11)6-5/h2,5H2,1H3,(H,6,11)/p+2 | ||
Molecular Formula: C4H10N6O++ | Mol. Weight: 158.1618 | Heavy Atoms: 11 |
Charge: 2 | Is Chiral: False | logP: -3.1643 |
HBD: 3 | HBA: 5 | TPSA: 101.59 |
#Bonds: 15 | #Rotatable Bonds: 3 | Shape Complexity: 0.5 |
Stereocomplexity: 0.0 | Ligand Type: Small Molecule |
Binding Affinity |
||
- |