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PDB Entry (6ete) Download |
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Visualizer: MichelaNGLo |
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| PDB ID: 6ete | Resolution: 1.47 Å | Exp. Method: X-RAY DIFFRACTION |
| PMID: - | DOI: None | |
Protein |
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| Protein Name: Lysine-specific demethylase 4D | |
| Protein Class: TRANSCRIPTION REGULATOR | |
| Uniprot ID/ACC: Q6B0I6 (KDM4D_HUMAN) | Organism: Homo sapiens |
| Gene Symbol: KDM4D | Gene ID: 55693 |
Pocket Descriptors | |
| Volume: 946.496 | Depth: 19.4772 |
| Hydrophobicity: 0.660099 | Drug Score: 0.631473 |
| Pocket Similarity: Calculate | |
Ligand |
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| Ligand Name: [2-(1-methyl-1,2,3,4-tetrazol-4-ium-5-yl)ethanoylamino]azanium | ||
| HET ID: BWK | PubChem: 137332070 | |
| DrugBank: - | ChEMBL: - | |
| Canonical SMILES: [NH3+]NC(=O)Cc1[nH+]nnn1C | ||
| Standard InChI: InChI=1S/C4H8N6O/c1-10-3(7-8-9-10)2-4(11)6-5/h2,5H2,1H3,(H,6,11)/p+2 | ||
| Molecular Formula: C4H10N6O++ | Mol. Weight: 158.1618 | Heavy Atoms: 11 |
| Charge: 2 | Is Chiral: False | logP: -3.1643 |
| HBD: 3 | HBA: 5 | TPSA: 101.59 |
| #Bonds: 15 | #Rotatable Bonds: 3 | Shape Complexity: 0.5 |
| Stereocomplexity: 0.0 | Ligand Type: Small Molecule | |
Binding Affinity |
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