PDB Entry (6ete)

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Visualizer: MichelaNGLo

PDB ID: 6ete Resolution: 1.47 Å Exp. Method: X-RAY DIFFRACTION
PMID: - DOI: None
Protein
Protein Name: Lysine-specific demethylase 4D
Protein Class: TRANSCRIPTION REGULATOR
Uniprot ID/ACC: Q6B0I6 (KDM4D_HUMAN) Organism: Homo sapiens
Gene Symbol: KDM4D Gene ID: 55693
Pocket Descriptors
Volume: 946.496 Depth: 19.4772
Hydrophobicity: 0.660099 Drug Score: 0.631473
Pocket Similarity: Calculate
Ligand
Ligand Name:   [2-(1-methyl-1,2,3,4-tetrazol-4-ium-5-yl)ethanoylamino]azanium
HET ID:   BWK PubChem:   137332070
DrugBank:   - ChEMBL:   -
Canonical SMILES:   [NH3+]NC(=O)Cc1[nH+]nnn1C
Standard InChI:   InChI=1S/C4H8N6O/c1-10-3(7-8-9-10)2-4(11)6-5/h2,5H2,1H3,(H,6,11)/p+2
Molecular Formula:   C4H10N6O++ Mol. Weight:   158.1618 Heavy Atoms:   11
Charge:   2 Is Chiral:   False logP:   -3.1643
HBD:   3 HBA:   5 TPSA:   101.59
#Bonds:   15 #Rotatable Bonds:   3 Shape Complexity:   0.5
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
-