PDB Entry (1lpz) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 1lpz | Resolution: 2.4 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 12061878 | DOI: 10.1021/jm0111346 | |
Protein |
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Protein Name: Coagulation factor X | |
Protein Class: HYDROLASE | |
Uniprot ID/ACC: P00742 (FA10_HUMAN) | Organism: Homo sapiens |
Gene Symbol: F10 | Gene ID: 2159 |
Pocket Descriptors | |
Volume: 541.12 | Depth: 18.1989 |
Hydrophobicity: 0.651163 | Drug Score: 0.291759 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: 1-(3-carbamimidoylbenzyl)-N-(3,5-dichlorobenzyl)-4-methyl-1H-indole-2-carboxamide | ||
HET ID: CMB | PubChem: 446982 | |
DrugBank: - | ChEMBL: CHEMBL92776 | |
Canonical SMILES: Clc1cc(CNC(=O)c2cc3c(n2Cc2cccc(c2)C(=N)N)cccc3C)cc(c1)Cl | ||
Standard InChI: InChI=1S/C25H22Cl2N4O/c1-15-4-2-7-22-21(15)12-23(25(32)30-13-17-9-19(26)11-20(27)10-17)31(22)14-16-5-3-6-18(8-16)24(28)29/h2-12H,13-14H2,1H3,(H3,28,29)(H,30,32) | ||
Molecular Formula: C25H22Cl2N4O | Mol. Weight: 465.3744 | Heavy Atoms: 32 |
Charge: 0 | Is Chiral: False | logP: 6.7098 |
HBD: 3 | HBA: 5 | TPSA: 83.9 |
#Bonds: 35 | #Rotatable Bonds: 7 | Shape Complexity: 0.12 |
Stereocomplexity: 0.0 | Ligand Type: Small Molecule |
Binding Affinity |
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Database Name | Value |
PDBBind | Ki : 25 nM |
BindingDB | Ki : 25 nM |
Binding MOAD | Ki : 25 nM |