PDB Entry (4y6d)

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PDB ID: 4y6d Resolution: 1.55 Å Exp. Method: X-RAY DIFFRACTION
PMID: - DOI: None
Protein
Protein Name: Coagulation factor X
Protein Class: HYDROLASE
Uniprot ID/ACC: P00742 (FA10_HUMAN) Organism: Homo sapiens
Gene Symbol: F10 Gene ID: 2159
Pocket Descriptors
Volume: 543.552 Depth: 19.0368
Hydrophobicity: 0.67052 Drug Score: 0.205709
Pocket Similarity: Calculate
Ligand
Ligand Name:   4-[(3S)-3-({[(E)-2-(5-chlorothiophen-2-yl)ethenyl]sulfonyl}amino)-2-oxopyrrolidin-1-yl]-3-fluoro-N,N-dimethylbenzamide
HET ID:   48U PubChem:   46226324
DrugBank:   - ChEMBL:   CHEMBL607085
Canonical SMILES:   O=C1[C@H](CCN1c1ccc(cc1F)C(=O)N(C)C)NS(=O)(=O)/C=C/c1ccc(s1)Cl
Standard InChI:   InChI=1S/C19H19ClFN3O4S2/c1-23(2)18(25)12-3-5-16(14(21)11-12)24-9-7-15(19(24)26)22-30(27,28)10-8-13-4-6-17(20)29-13/h3-6,8,10-11,15,22H,7,9H2,1-2H3/b10-8+/t15-/m0/s1
Molecular Formula:   C19H19ClFN3O4S2 Mol. Weight:   471.95328 Heavy Atoms:   30
Charge:   0 Is Chiral:   True logP:   4.4747
HBD:   1 HBA:   8 TPSA:   123.41
#Bonds:   33 #Rotatable Bonds:   7 Shape Complexity:   0.2631579
Stereocomplexity:   0.05263158 Ligand Type:   Small Molecule
Binding Affinity
Database Name Value
BindingDB Ki : 1.5 nM, Ki : 4.829999923706055 nM