PDB Entry (2vwo) Download |
||
Visualizer: MichelaNGLo |
||
PDB ID: 2vwo | Resolution: 1.6 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 19200624 | DOI: 10.1016/j.ejmech.2008.12.025 | |
Protein |
|
Protein Name: Coagulation factor X | |
Protein Class: HYDROLASE | |
Uniprot ID/ACC: P00742 (FA10_HUMAN) | Organism: Homo sapiens |
Gene Symbol: F10 | Gene ID: 2159 |
Pocket Descriptors | |
Volume: 651.2 | Depth: 18.8552 |
Hydrophobicity: 0.655914 | Drug Score: 0.359763 |
Pocket Similarity: Calculate |
Ligand |
||
Ligand Name: 5-CHLORO-THIOPHENE-2-CARBOXYLIC ACID ((3S,4S)-4-FLUORO- 1-{[2-FLUORO-4-(2-OXO-2H-PYRIDIN-1-YL)-PHENYLCARBAMOYL]-METHYL}-PYRROLIDIN-3-YL)-AMIDE | ||
HET ID: LZG | PubChem: 42628063 | |
DrugBank: DB08143 | ChEMBL: CHEMBL550453 | |
Canonical SMILES: O=C(Nc1ccc(cc1F)n1ccccc1=O)CN1C[C@@H]([C@H](C1)F)NC(=O)c1ccc(s1)Cl | ||
Standard InChI: InChI=1S/C22H19ClF2N4O3S/c23-19-7-6-18(33-19)22(32)27-17-11-28(10-15(17)25)12-20(30)26-16-5-4-13(9-14(16)24)29-8-2-1-3-21(29)31/h1-9,15,17H,10-12H2,(H,26,30)(H,27,32)/t15-,17-/m0/s1 | ||
Molecular Formula: C22H19ClF2N4O3S | Mol. Weight: 492.92606 | Heavy Atoms: 33 |
Charge: 0 | Is Chiral: True | logP: 3.4841 |
HBD: 2 | HBA: 8 | TPSA: 111.68 |
#Bonds: 38 | #Rotatable Bonds: 8 | Shape Complexity: 0.22727273 |
Stereocomplexity: 0.09090909 | Ligand Type: Small Molecule |
Binding Affinity |
|
Database Name | Value |
PDBBind | Ki : 31 nM |
BindingDB | Ki : 31 nM |