PDB Entry (2w26)

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PDB ID: 2w26 Resolution: 2.08 Å Exp. Method: X-RAY DIFFRACTION
PMID: 16161994 DOI: 10.1021/jm050101d
Protein
Protein Name: Coagulation factor X
Protein Class: HYDROLASE
Uniprot ID/ACC: P00742 (FA10_HUMAN) Organism: Homo sapiens
Gene Symbol: F10 Gene ID: 2159
Pocket Descriptors
Volume: 767.744 Depth: 20.5017
Hydrophobicity: 0.668203 Drug Score: 0.328492
Pocket Similarity: Calculate
Ligand
Ligand Name:   5-chloro-N-({(5S)-2-oxo-3-[4-(3-oxomorpholin-4-yl)phenyl]-1,3-oxazolidin-5-yl}methyl)thiophene-2-carboxamide
HET ID:   RIV PubChem:   9875401
DrugBank:   DB06228 ChEMBL:   CHEMBL198362
Canonical SMILES:   O=C1O[C@H](CN1c1ccc(cc1)N1CCOCC1=O)CNC(=O)c1ccc(s1)Cl
Standard InChI:   InChI=1S/C19H18ClN3O5S/c20-16-6-5-15(29-16)18(25)21-9-14-10-23(19(26)28-14)13-3-1-12(2-4-13)22-7-8-27-11-17(22)24/h1-6,14H,7-11H2,(H,21,25)/t14-/m0/s1
Molecular Formula:   C19H18ClN3O5S Mol. Weight:   435.88132 Heavy Atoms:   29
Charge:   0 Is Chiral:   True logP:   3.0408
HBD:   1 HBA:   9 TPSA:   116.42
#Bonds:   33 #Rotatable Bonds:   6 Shape Complexity:   0.31578946
Stereocomplexity:   0.05263158 Ligand Type:   Small Molecule
Binding Affinity
Database Name Value
PDBBind Ki : 0.4000000059604645 nM
BindingDB Ki : 0.6600000262260437 nM, Ki : 0.4000000059604645 nM, Ki : 1.600000023841858 nM, Ki : 8.5 nM, Ki : 0.699999988079071 nM, Ki : 2.200000047683716 nM, Ki : 4.590000152587891 nM, Ki : 400 nM, Ki : 1.399999976158142 nM, Ki : 14 nM, Ki : 700 nM
Binding MOAD Ki : 0.4000000059604645 nM