PDB Entry (6f5s)

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Visualizer: MichelaNGLo

PDB ID: 6f5s Resolution: 1.48 Å Exp. Method: X-RAY DIFFRACTION
PMID: - DOI: None
Protein
Protein Name: Lysine-specific demethylase 4D
Protein Class: TRANSCRIPTION REGULATOR
Uniprot ID/ACC: Q6B0I6 (KDM4D_HUMAN) Organism: Homo sapiens
Gene Symbol: KDM4D Gene ID: 55693
Pocket Descriptors
Volume: 1072.7 Depth: 24.0965
Hydrophobicity: 0.659574 Drug Score: 0.528529
Pocket Similarity: Calculate
Ligand
Ligand Name:   ~{N}-(3-morpholin-4-ylpropyl)-4-(2~{H}-1,2,3,4-tetrazol-5-yl)pyridine-2-carboxamide
HET ID:   CQT PubChem:   135121925
DrugBank:   - ChEMBL:   -
Canonical SMILES:   O=C(c1nccc(c1)c1n[nH]nn1)NCCCN1CCOCC1
Standard InChI:   InChI=1S/C14H19N7O2/c22-14(16-3-1-5-21-6-8-23-9-7-21)12-10-11(2-4-15-12)13-17-19-20-18-13/h2,4,10H,1,3,5-9H2,(H,16,22)(H,17,18,19,20)
Molecular Formula:   C14H19N7O2 Mol. Weight:   317.34637 Heavy Atoms:   23
Charge:   0 Is Chiral:   False logP:   0.0426
HBD:   2 HBA:   8 TPSA:   108.92
#Bonds:   26 #Rotatable Bonds:   7 Shape Complexity:   0.5
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
-