PDB Entry (6f5t)

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PDB ID: 6f5t Resolution: 1.58 Å Exp. Method: X-RAY DIFFRACTION
PMID: - DOI: None
Protein
Protein Name: Lysine-specific demethylase 4D
Protein Class: TRANSCRIPTION REGULATOR
Uniprot ID/ACC: Q6B0I6 (KDM4D_HUMAN) Organism: Homo sapiens
Gene Symbol: KDM4D Gene ID: 55693
Pocket Descriptors
Volume: 707.584 Depth: 19.02
Hydrophobicity: 0.668639 Drug Score: 0.491452
Pocket Similarity: Calculate
Ligand
Ligand Name:   ~{N}-oxidanyl-4-(2~{H}-1,2,3,4-tetrazol-5-yl)pyridine-2-carboxamide
HET ID:   CQK PubChem:   135567437
DrugBank:   - ChEMBL:   -
Canonical SMILES:   ONC(=O)c1nccc(c1)c1n[nH]nn1
Standard InChI:   InChI=1S/C7H6N6O2/c14-7(11-15)5-3-4(1-2-8-5)6-9-12-13-10-6/h1-3,15H,(H,11,14)(H,9,10,12,13)
Molecular Formula:   C7H6N6O2 Mol. Weight:   206.16154 Heavy Atoms:   15
Charge:   0 Is Chiral:   False logP:   -0.2284
HBD:   3 HBA:   7 TPSA:   116.68
#Bonds:   17 #Rotatable Bonds:   3 Shape Complexity:   0.0
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
-