PDB Entry (1nfx)

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Visualizer: MichelaNGLo

PDB ID: 1nfx Resolution: 2.15 Å Exp. Method: X-RAY DIFFRACTION
PMID: 12593649 DOI: 10.1021/jm0203837
Protein
Protein Name: Coagulation factor X
Protein Class: HYDROLASE
Uniprot ID/ACC: P00742 (FA10_HUMAN) Organism: Homo sapiens
Gene Symbol: F10 Gene ID: 2159
Pocket Descriptors
Volume: 537.856 Depth: 19.7302
Hydrophobicity: 0.639752 Drug Score: 0.258614
Pocket Similarity: Calculate
Ligand
Ligand Name:   4-[(6-CHLORO-1-BENZOTHIEN-2-YL)SULFONYL]-1-{[1-(2-HYDROXYETHYL)-1H-PYRROLO[3,2-C]PYRIDIN-2-YL]METHYL}PIPERAZIN-2-ONE
HET ID:   RDR PubChem:   447361
DrugBank:   - ChEMBL:   CHEMBL157813
Canonical SMILES:   OCCn1c(CN2CCN(CC2=O)S(=O)(=O)c2cc3c(s2)cc(cc3)Cl)cc2c1ccnc2
Standard InChI:   InChI=1S/C22H21ClN4O4S2/c23-17-2-1-15-10-22(32-20(15)11-17)33(30,31)26-6-5-25(21(29)14-26)13-18-9-16-12-24-4-3-19(16)27(18)7-8-28/h1-4,9-12,28H,5-8,13-14H2
Molecular Formula:   C22H21ClN4O4S2 Mol. Weight:   505.00955 Heavy Atoms:   33
Charge:   0 Is Chiral:   False logP:   3.8864
HBD:   1 HBA:   9 TPSA:   132.36
#Bonds:   37 #Rotatable Bonds:   6 Shape Complexity:   0.27272728
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
Database Name Value
PDBBind Ki : 3 nM
BindingDB Ki : 3 nM
Binding MOAD Ki : 3 nM