PDB Entry (1nfx) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 1nfx | Resolution: 2.15 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 12593649 | DOI: 10.1021/jm0203837 | |
Protein |
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Protein Name: Coagulation factor X | |
Protein Class: HYDROLASE | |
Uniprot ID/ACC: P00742 (FA10_HUMAN) | Organism: Homo sapiens |
Gene Symbol: F10 | Gene ID: 2159 |
Pocket Descriptors | |
Volume: 537.856 | Depth: 19.7302 |
Hydrophobicity: 0.639752 | Drug Score: 0.258614 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: 4-[(6-CHLORO-1-BENZOTHIEN-2-YL)SULFONYL]-1-{[1-(2-HYDROXYETHYL)-1H-PYRROLO[3,2-C]PYRIDIN-2-YL]METHYL}PIPERAZIN-2-ONE | ||
HET ID: RDR | PubChem: 447361 | |
DrugBank: - | ChEMBL: CHEMBL157813 | |
Canonical SMILES: OCCn1c(CN2CCN(CC2=O)S(=O)(=O)c2cc3c(s2)cc(cc3)Cl)cc2c1ccnc2 | ||
Standard InChI: InChI=1S/C22H21ClN4O4S2/c23-17-2-1-15-10-22(32-20(15)11-17)33(30,31)26-6-5-25(21(29)14-26)13-18-9-16-12-24-4-3-19(16)27(18)7-8-28/h1-4,9-12,28H,5-8,13-14H2 | ||
Molecular Formula: C22H21ClN4O4S2 | Mol. Weight: 505.00955 | Heavy Atoms: 33 |
Charge: 0 | Is Chiral: False | logP: 3.8864 |
HBD: 1 | HBA: 9 | TPSA: 132.36 |
#Bonds: 37 | #Rotatable Bonds: 6 | Shape Complexity: 0.27272728 |
Stereocomplexity: 0.0 | Ligand Type: Small Molecule |
Binding Affinity |
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Database Name | Value |
PDBBind | Ki : 3 nM |
BindingDB | Ki : 3 nM |
Binding MOAD | Ki : 3 nM |