PDB Entry (6eiu)

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Visualizer: MichelaNGLo

PDB ID: 6eiu Resolution: 1.88 Å Exp. Method: X-RAY DIFFRACTION
PMID: - DOI: None
Protein
Protein Name: Lysine-specific demethylase 5B
Protein Class: TRANSCRIPTION REGULATOR
Uniprot ID/ACC: Q9UGL1 (KDM5B_HUMAN) Organism: Homo sapiens
Gene Symbol: KDM5B Gene ID: 10765
Pocket Descriptors
Volume: 1697.73 Depth: 26.2899
Hydrophobicity: 0.669725 Drug Score: 0.933856
Pocket Similarity: Calculate
Ligand
Ligand Name:   8-oxidanyl-6-phenyl-7-propan-2-yl-imidazo[1,2-b]pyridazine-3-carbonitrile
HET ID:   B6T PubChem:   133054007
DrugBank:   - ChEMBL:   -
Canonical SMILES:   N#Cc1cnc2n1nc(c1ccccc1)c(c2O)C(C)C
Standard InChI:   InChI=1S/C16H14N4O/c1-10(2)13-14(11-6-4-3-5-7-11)19-20-12(8-17)9-18-16(20)15(13)21/h3-7,9-10,21H,1-2H3
Molecular Formula:   C16H14N4O Mol. Weight:   278.30856 Heavy Atoms:   21
Charge:   0 Is Chiral:   False logP:   3.09698
HBD:   1 HBA:   5 TPSA:   74.21
#Bonds:   23 #Rotatable Bonds:   2 Shape Complexity:   0.2
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
-