PDB Entry (6eiy)

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Visualizer: MichelaNGLo

PDB ID: 6eiy Resolution: 2.15 Å Exp. Method: X-RAY DIFFRACTION
PMID: - DOI: None
Protein
Protein Name: Lysine-specific demethylase 5B
Protein Class: TRANSCRIPTION REGULATOR
Uniprot ID/ACC: Q9UGL1 (KDM5B_HUMAN) Organism: Homo sapiens
Gene Symbol: KDM5B Gene ID: 10765
Pocket Descriptors
Volume: 957.952 Depth: 15.7987
Hydrophobicity: 0.677778 Drug Score: 0.878904
Pocket Similarity: Calculate
Ligand
Ligand Name:   2-chloranyl-~{N}-[2-[4-(3-cyano-7-oxidanylidene-6-propan-2-yl-4~{H}-pyrazolo[1,5-a]pyrimidin-5-yl)pyrazol-1-yl]ethyl]ethanamide
HET ID:   B6W PubChem:   133054008
DrugBank:   - ChEMBL:   -
Canonical SMILES:   ClCC(=O)NCCn1ncc(c1)c1[nH]c2c(C#N)cnn2c(=O)c1C(C)C
Standard InChI:   InChI=1S/C17H18ClN7O2/c1-10(2)14-15(23-16-11(6-19)7-22-25(16)17(14)27)12-8-21-24(9-12)4-3-20-13(26)5-18/h7-10,23H,3-5H2,1-2H3,(H,20,26)
Molecular Formula:   C17H18ClN7O2 Mol. Weight:   387.82352 Heavy Atoms:   27
Charge:   0 Is Chiral:   False logP:   1.62708
HBD:   2 HBA:   8 TPSA:   120.87
#Bonds:   30 #Rotatable Bonds:   7 Shape Complexity:   0.375
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
-