PDB Entry (6h4w)

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Visualizer: MichelaNGLo

PDB ID: 6h4w Resolution: 2.81 Å Exp. Method: X-RAY DIFFRACTION
PMID: 31158747 DOI: 10.1016/j.ejmech.2019.05.041
Protein
Protein Name: Lysine-specific demethylase 4A
Protein Class: TRANSCRIPTION REGULATOR
Uniprot ID/ACC: O75164 (KDM4A_HUMAN) Organism: Homo sapiens
Gene Symbol: KDM4A Gene ID: 9682
Pocket Descriptors
Volume: 162.88 Depth: 17.2665
Hydrophobicity: 0.666667 Drug Score: 0.0171781
Pocket Similarity: Calculate
Ligand
Ligand Name:   8-[4-[2-[4-(3-chlorophenyl)-4-methyl-piperidin-1-yl]ethyl]pyrazol-1-yl]-3~{H}-pyrido[3,4-d]pyrimidin-4-one
HET ID:   FQQ PubChem:   138393340
DrugBank:   - ChEMBL:   -
Canonical SMILES:   O=c1[nH]cnc2c1ccnc2n1ncc(c1)CCN1CCC(CC1)(C)C
Standard InChI:   InChI=1S/C19H24N6O/c1-19(2)5-9-24(10-6-19)8-4-14-11-23-25(12-14)17-16-15(3-7-20-17)18(26)22-13-21-16/h3,7,11-13H,4-6,8-10H2,1-2H3,(H,21,22,26)
Molecular Formula:   C19H24N6O Mol. Weight:   352.43347 Heavy Atoms:   26
Charge:   0 Is Chiral:   False logP:   2.1062
HBD:   1 HBA:   6 TPSA:   79.7
#Bonds:   30 #Rotatable Bonds:   4 Shape Complexity:   0.47368422
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
-