PDB Entry (6cg1) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 6cg1 | Resolution: 2.16 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 29627262 | DOI: 10.1016/j.bmcl.2018.03.083 | |
Protein |
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Protein Name: Lysine-specific demethylase 4A | |
Protein Class: TRANSCRIPTION REGULATOR | |
Uniprot ID/ACC: O75164 (KDM4A_HUMAN) | Organism: Homo sapiens |
Gene Symbol: KDM4A | Gene ID: 9682 |
Pocket Descriptors | |
Volume: 131.968 | Depth: 17.3507 |
Hydrophobicity: 0.663636 | Drug Score: 0.00697496 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: 3-{[(4-fluorophenyl)methyl]amino}pyridine-4-carboxylic acid | ||
HET ID: QC1 | PubChem: 81750967 | |
DrugBank: - | ChEMBL: - | |
Canonical SMILES: Fc1ccc(cc1)CNc1cnccc1C(=O)O | ||
Standard InChI: InChI=1S/C13H11FN2O2/c14-10-3-1-9(2-4-10)7-16-12-8-15-6-5-11(12)13(17)18/h1-6,8,16H,7H2,(H,17,18) | ||
Molecular Formula: C13H11FN2O2 | Mol. Weight: 246.23705 | Heavy Atoms: 18 |
Charge: 0 | Is Chiral: False | logP: 2.604 |
HBD: 2 | HBA: 4 | TPSA: 62.22 |
#Bonds: 19 | #Rotatable Bonds: 4 | Shape Complexity: 0.07692308 |
Stereocomplexity: 0.0 | Ligand Type: Small Molecule |
Binding Affinity |
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