PDB Entry (6cg1)

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Visualizer: MichelaNGLo

PDB ID: 6cg1 Resolution: 2.16 Å Exp. Method: X-RAY DIFFRACTION
PMID: 29627262 DOI: 10.1016/j.bmcl.2018.03.083
Protein
Protein Name: Lysine-specific demethylase 4A
Protein Class: TRANSCRIPTION REGULATOR
Uniprot ID/ACC: O75164 (KDM4A_HUMAN) Organism: Homo sapiens
Gene Symbol: KDM4A Gene ID: 9682
Pocket Descriptors
Volume: 131.968 Depth: 17.3507
Hydrophobicity: 0.663636 Drug Score: 0.00697496
Pocket Similarity: Calculate
Ligand
Ligand Name:   3-{[(4-fluorophenyl)methyl]amino}pyridine-4-carboxylic acid
HET ID:   QC1 PubChem:   81750967
DrugBank:   - ChEMBL:   -
Canonical SMILES:   Fc1ccc(cc1)CNc1cnccc1C(=O)O
Standard InChI:   InChI=1S/C13H11FN2O2/c14-10-3-1-9(2-4-10)7-16-12-8-15-6-5-11(12)13(17)18/h1-6,8,16H,7H2,(H,17,18)
Molecular Formula:   C13H11FN2O2 Mol. Weight:   246.23705 Heavy Atoms:   18
Charge:   0 Is Chiral:   False logP:   2.604
HBD:   2 HBA:   4 TPSA:   62.22
#Bonds:   19 #Rotatable Bonds:   4 Shape Complexity:   0.07692308
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
-