PDB Entry (6rbi) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 6rbi | Resolution: 2.21 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: - | DOI: None | |
Protein |
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Protein Name: Lysine-specific demethylase 5B | |
Protein Class: TRANSCRIPTION REGULATOR | |
Uniprot ID/ACC: Q9UGL1 (KDM5B_HUMAN) | Organism: Homo sapiens |
Gene Symbol: KDM5B | Gene ID: 10765 |
Pocket Descriptors | |
Volume: 1031.42 | Depth: 21.0612 |
Hydrophobicity: 0.658416 | Drug Score: 0.704688 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: 5-(1~{H}-1,2,3,4-tetrazol-5-yl)quinolin-8-ol | ||
HET ID: JX8 | PubChem: 135921708 | |
DrugBank: - | ChEMBL: CHEMBL1406064 | |
Canonical SMILES: Oc1ccc(c2c1nccc2)c1nnn[nH]1 | ||
Standard InChI: InChI=1S/C10H7N5O/c16-8-4-3-7(10-12-14-15-13-10)6-2-1-5-11-9(6)8/h1-5,16H,(H,12,13,14,15) | ||
Molecular Formula: C10H7N5O | Mol. Weight: 213.19548 | Heavy Atoms: 16 |
Charge: 0 | Is Chiral: False | logP: 1.1205 |
HBD: 2 | HBA: 5 | TPSA: 87.58 |
#Bonds: 19 | #Rotatable Bonds: 1 | Shape Complexity: 0.0 |
Stereocomplexity: 0.0 | Ligand Type: Small Molecule |
Binding Affinity |
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