PDB Entry (7a04)

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Visualizer: MichelaNGLo

PDB ID: 7a04 Resolution: 2.15 Å Exp. Method: X-RAY DIFFRACTION
PMID: 32977218 DOI: 10.1016/j.ejmech.2020.112797
Protein
Protein Name: Choline kinase alpha
Protein Class: TRANSFERASE
Uniprot ID/ACC: P35790 (CHKA_HUMAN) Organism: Homo sapiens
Gene Symbol: CHKA Gene ID: 1119
Pocket Descriptors
Volume: 107.072 Depth: 10.4929
Hydrophobicity: 0.777778 Drug Score: 0.00745962
Pocket Similarity: Calculate
Ligand
Ligand Name:   1-(phenylmethyl)-4-pyrrolidin-1-yl-pyridin-1-ium
HET ID:   QTK PubChem:   22613603
DrugBank:   - ChEMBL:   CHEMBL1789489
Canonical SMILES:   c1ccc(cc1)C[n+]1ccc(cc1)N1CCCC1
Standard InChI:   InChI=1S/C16H19N2/c1-2-6-15(7-3-1)14-17-12-8-16(9-13-17)18-10-4-5-11-18/h1-3,6-9,12-13H,4-5,10-11,14H2/q+1
Molecular Formula:   C16H19N2+ Mol. Weight:   239.33546 Heavy Atoms:   18
Charge:   1 Is Chiral:   False logP:   2.6876
HBD:   0 HBA:   1 TPSA:   7.12
#Bonds:   20 #Rotatable Bonds:   3 Shape Complexity:   0.3125
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
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