PDB Entry (4loy)

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Visualizer: MichelaNGLo

PDB ID: 4loy Resolution: 1.77 Å Exp. Method: X-RAY DIFFRACTION
PMID: 24175584 DOI: 10.1021/jm4005835
Protein
Protein Name: Prothrombin
Protein Class: HYDROLASE
Uniprot ID/ACC: P00734 (THRB_HUMAN) Organism: Homo sapiens
Gene Symbol: F2 Gene ID: 2147
Pocket Descriptors
Volume: 933.184 Depth: 25.8828
Hydrophobicity: 0.673228 Drug Score: 0.527809
Pocket Similarity: Calculate
Ligand
Ligand Name:   5-Chloro-thiophene-2-carboxylic acid [(S)-2-[2-chloro-5-fluoro-3-(2-oxo-piperidin-1-yl)-benzenesulfonylamino]-3-(4-methyl-piperazin-1-yl)-3-oxo-propyl]-amide
HET ID:   6XS PubChem:   72200999
DrugBank:   - ChEMBL:   CHEMBL3091502
Canonical SMILES:   CN1CCN(CC1)C(=O)[C@@H](NS(=O)(=O)c1cc(F)cc(c1Cl)N1CCCCC1=O)CNC(=O)c1ccc(s1)Cl
Standard InChI:   InChI=1S/C24H28Cl2FN5O5S2/c1-30-8-10-31(11-9-30)24(35)16(14-28-23(34)18-5-6-20(25)38-18)29-39(36,37)19-13-15(27)12-17(22(19)26)32-7-3-2-4-21(32)33/h5-6,12-13,16,29H,2-4,7-11,14H2,1H3,(H,28,34)/t16-/m0/s1
Molecular Formula:   C24H28Cl2FN5O5S2 Mol. Weight:   620.544 Heavy Atoms:   39
Charge:   0 Is Chiral:   True logP:   4.3652
HBD:   2 HBA:   11 TPSA:   155.75
#Bonds:   43 #Rotatable Bonds:   10 Shape Complexity:   0.45833334
Stereocomplexity:   0.041666668 Ligand Type:   Small Molecule
Binding Affinity
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