PDB Entry (3cs7)

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Visualizer: MichelaNGLo

PDB ID: 3cs7 Resolution: 2.2 Å Exp. Method: X-RAY DIFFRACTION
PMID: 18550370 DOI: 10.1016/j.bmcl.2008.05.095
Protein
Protein Name: Coagulation factor X
Protein Class: HYDROLASE
Uniprot ID/ACC: P00742 (FA10_HUMAN) Organism: Homo sapiens
Gene Symbol: F10 Gene ID: 2159
Pocket Descriptors
Volume: 825.152 Depth: 19.0872
Hydrophobicity: 0.660465 Drug Score: 0.286927
Pocket Similarity: Calculate
Ligand
Ligand Name:   1-(4-methoxyphenyl)-6-(4-(1-(pyrrolidin-1-ylmethyl)cyclopropyl)phenyl)-3-(trifluoromethyl)-5,6-dihydro-1H-pyrazolo[3,4-c]pyridin-7(4H)-one
HET ID:   LG0 PubChem:   24836819
DrugBank:   - ChEMBL:   CHEMBL461091
Canonical SMILES:   COc1ccc(cc1)n1nc(c2c1C(=O)N(CC2)c1ccc(cc1)C1(CC1)CN1CCCC1)C(F)(F)F
Standard InChI:   InChI=1S/C28H29F3N4O2/c1-37-22-10-8-21(9-11-22)35-24-23(25(32-35)28(29,30)31)12-17-34(26(24)36)20-6-4-19(5-7-20)27(13-14-27)18-33-15-2-3-16-33/h4-11H,2-3,12-18H2,1H3
Molecular Formula:   C28H29F3N4O2 Mol. Weight:   510.55066 Heavy Atoms:   37
Charge:   0 Is Chiral:   False logP:   5.2329
HBD:   0 HBA:   6 TPSA:   50.6
#Bonds:   42 #Rotatable Bonds:   7 Shape Complexity:   0.42857143
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
Database Name Value
PDBBind Ki : 0.021000001579523087 nM
BindingDB Ki : 0.019999999552965164 nM
Binding MOAD Ki : 0.020999999716877937 nM