PDB Entry (1fax) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 1fax | Resolution: 3.0 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 8939944 | DOI: None | |
Protein |
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Protein Name: Coagulation factor X | |
Protein Class: HYDROLASE | |
Uniprot ID/ACC: P00742 (FA10_HUMAN) | Organism: Homo sapiens |
Gene Symbol: F10 | Gene ID: 2159 |
Pocket Descriptors | |
Volume: 472.512 | Depth: 19.5387 |
Hydrophobicity: 0.647799 | Drug Score: 0.239438 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: (2S)-3-(7-carbamimidoylnaphthalen-2-yl)-2-[4-({(3R)-1-[(1Z)-ethanimidoyl]pyrrolidin-3-yl}oxy)phenyl]propanoic acid | ||
HET ID: DX9 | PubChem: 122129 | |
DrugBank: - | ChEMBL: CHEMBL1232407 | |
Canonical SMILES: CC(=N)N1CC[C@@H](C1)Oc1ccc(cc1)[C@@H](C(=O)O)Cc1ccc2c(c1)cc(cc2)C(=N)N | ||
Standard InChI: InChI=1S/C26H28N4O3/c1-16(27)30-11-10-23(15-30)33-22-8-6-19(7-9-22)24(26(31)32)13-17-2-3-18-4-5-20(25(28)29)14-21(18)12-17/h2-9,12,14,23-24,27H,10-11,13,15H2,1H3,(H3,28,29)(H,31,32)/t23-,24-/m0/s1 | ||
Molecular Formula: C26H28N4O3 | Mol. Weight: 444.5255 | Heavy Atoms: 33 |
Charge: 0 | Is Chiral: True | logP: 4.8227 |
HBD: 4 | HBA: 7 | TPSA: 123.49 |
#Bonds: 38 | #Rotatable Bonds: 8 | Shape Complexity: 0.26923078 |
Stereocomplexity: 0.07692308 | Ligand Type: Small Molecule |
Binding Affinity |
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Database Name | Value |
PDBBind | Ki : 41 nM |
BindingDB | Ki : 41 nM, Ki : 40 nM, Ki : 22 nM, Ki : 20 nM, Ki : 40 nM, IC50 : 70 nM, IC50 : 130 nM |