PDB Entry (2y7x)

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Visualizer: MichelaNGLo

PDB ID: 2y7x Resolution: 1.9 Å Exp. Method: X-RAY DIFFRACTION
PMID: 21349711 DOI: 10.1016/j.bmcl.2011.01.129
Protein
Protein Name: Coagulation factor X
Protein Class: HYDROLASE
Uniprot ID/ACC: P00742 (FA10_HUMAN) Organism: Homo sapiens
Gene Symbol: F10 Gene ID: 2159
Pocket Descriptors
Volume: 510.848 Depth: 18.8552
Hydrophobicity: 0.652174 Drug Score: 0.232522
Pocket Similarity: Calculate
Ligand
Ligand Name:   6-CHLORO-N-[(3S)-1-(5-FLUORO-1,2,3,4-TETRAHYDROISOQUINOLIN-6-YL)-2-OXO-PYRROLIDIN-3-YL]NAPHTHALENE-2-SULFONAMIDE
HET ID:   MZA PubChem:   11950431
DrugBank:   - ChEMBL:   CHEMBL1615104
Canonical SMILES:   Clc1ccc2c(c1)ccc(c2)S(=O)(=O)N[C@H]1CCN(C1=O)c1ccc2c(c1F)CCNC2
Standard InChI:   InChI=1S/C23H21ClFN3O3S/c24-17-4-1-15-12-18(5-2-14(15)11-17)32(30,31)27-20-8-10-28(23(20)29)21-6-3-16-13-26-9-7-19(16)22(21)25/h1-6,11-12,20,26-27H,7-10,13H2/t20-/m0/s1
Molecular Formula:   C23H21ClFN3O3S Mol. Weight:   473.94754 Heavy Atoms:   32
Charge:   0 Is Chiral:   True logP:   5.2273
HBD:   2 HBA:   6 TPSA:   86.89
#Bonds:   37 #Rotatable Bonds:   4 Shape Complexity:   0.26086956
Stereocomplexity:   0.04347826 Ligand Type:   Small Molecule
Binding Affinity
Database Name Value
PDBBind Ki : 1.2999999523162842 nM
BindingDB Ki : 1.2999999523162842 nM
Binding MOAD Ki : 1 nM