PDB Entry (4hhz)

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Visualizer: MichelaNGLo

PDB ID: 4hhz Resolution: 2.72 Å Exp. Method: X-RAY DIFFRACTION
PMID: 23473053 DOI: 10.1021/jm301825t
Protein
Protein Name: Poly [ADP-ribose] polymerase 1
Protein Class: TRANSCRIPTION REGULATOR
Uniprot ID/ACC: P09874 (PARP1_HUMAN) Organism: Homo sapiens
Gene Symbol: PARP1 Gene ID: 142
Pocket Descriptors
Volume: 326.528 Depth: 25.7847
Hydrophobicity: 0.677725 Drug Score: 0.0332076
Pocket Similarity: Calculate
Ligand
Ligand Name:   N-{(2S)-1-[4-(4-fluorophenyl)-3,6-dihydropyridin-1(2H)-yl]-1-oxopropan-2-yl}-2-[(9aR)-7-oxo-2,3,7,8,9,9a-hexahydro-1H-benzo[de][1,7]naphthyridin-1-yl]acetamide
HET ID:   15S PubChem:   137347936
DrugBank:   - ChEMBL:   -
Canonical SMILES:   O=C(CN1CCc2c3[C@@H]1CNC(=O)c3ccc2)N[C@H](C(=O)N1CCC(=CC1)c1ccc(cc1)F)C
Standard InChI:   InChI=1S/C27H29FN4O3/c1-17(27(35)31-12-9-19(10-13-31)18-5-7-21(28)8-6-18)30-24(33)16-32-14-11-20-3-2-4-22-25(20)23(32)15-29-26(22)34/h2-9,17,23H,10-16H2,1H3,(H,29,34)(H,30,33)/t17-,23-/m0/s1
Molecular Formula:   C27H29FN4O3 Mol. Weight:   476.54257 Heavy Atoms:   35
Charge:   0 Is Chiral:   True logP:   2.8844
HBD:   2 HBA:   7 TPSA:   81.75
#Bonds:   41 #Rotatable Bonds:   7 Shape Complexity:   0.37037036
Stereocomplexity:   0.074074075 Ligand Type:   Small Molecule
Binding Affinity
Database Name Value
PDBBind IC50 : 19 nM