PDB Entry (4hhz) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 4hhz | Resolution: 2.72 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 23473053 | DOI: 10.1021/jm301825t | |
Protein |
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Protein Name: Poly [ADP-ribose] polymerase 1 | |
Protein Class: TRANSCRIPTION REGULATOR | |
Uniprot ID/ACC: P09874 (PARP1_HUMAN) | Organism: Homo sapiens |
Gene Symbol: PARP1 | Gene ID: 142 |
Pocket Descriptors | |
Volume: 326.528 | Depth: 25.7847 |
Hydrophobicity: 0.677725 | Drug Score: 0.0332076 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: N-{(2S)-1-[4-(4-fluorophenyl)-3,6-dihydropyridin-1(2H)-yl]-1-oxopropan-2-yl}-2-[(9aR)-7-oxo-2,3,7,8,9,9a-hexahydro-1H-benzo[de][1,7]naphthyridin-1-yl]acetamide | ||
HET ID: 15S | PubChem: 137347936 | |
DrugBank: - | ChEMBL: - | |
Canonical SMILES: O=C(CN1CCc2c3[C@@H]1CNC(=O)c3ccc2)N[C@H](C(=O)N1CCC(=CC1)c1ccc(cc1)F)C | ||
Standard InChI: InChI=1S/C27H29FN4O3/c1-17(27(35)31-12-9-19(10-13-31)18-5-7-21(28)8-6-18)30-24(33)16-32-14-11-20-3-2-4-22-25(20)23(32)15-29-26(22)34/h2-9,17,23H,10-16H2,1H3,(H,29,34)(H,30,33)/t17-,23-/m0/s1 | ||
Molecular Formula: C27H29FN4O3 | Mol. Weight: 476.54257 | Heavy Atoms: 35 |
Charge: 0 | Is Chiral: True | logP: 2.8844 |
HBD: 2 | HBA: 7 | TPSA: 81.75 |
#Bonds: 41 | #Rotatable Bonds: 7 | Shape Complexity: 0.37037036 |
Stereocomplexity: 0.074074075 | Ligand Type: Small Molecule |
Binding Affinity |
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Database Name | Value |
PDBBind | IC50 : 19 nM |