PDB Entry (5h17) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 5h17 | Resolution: 2.3 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 28072869 | DOI: 10.1371/journal.pone.0169855 | |
Protein |
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Protein Name: Polycomb protein EED | |
Protein Class: TRANSCRIPTION REGULATOR | |
Uniprot ID/ACC: O75530 (EED_HUMAN) | Organism: Homo sapiens |
Gene Symbol: EED | Gene ID: 8726 |
Pocket Descriptors | |
Volume: 1779.52 | Depth: 24.7968 |
Hydrophobicity: 0.674157 | Drug Score: 0.810215 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: (3R,4aS,10aS)-6-methoxy-3-[(3-methoxyphenyl)methyl]-1-methyl-3,4,4a,5,10,10a-hexahydro-2H-benzo[g]quinoline | ||
HET ID: LQE | PubChem: 137349702 | |
DrugBank: - | ChEMBL: CHEMBL4097892 | |
Canonical SMILES: COc1cccc(c1)C[C@@H]1CN(C)[C@@H]2[C@@H](C1)Cc1c(C2)cccc1OC | ||
Standard InChI: InChI=1S/C23H29NO2/c1-24-15-17(10-16-6-4-8-20(12-16)25-2)11-19-13-21-18(14-22(19)24)7-5-9-23(21)26-3/h4-9,12,17,19,22H,10-11,13-15H2,1-3H3/t17-,19-,22-/m0/s1 | ||
Molecular Formula: C23H29NO2 | Mol. Weight: 351.48187 | Heavy Atoms: 26 |
Charge: 0 | Is Chiral: True | logP: 3.9195 |
HBD: 0 | HBA: 3 | TPSA: 21.7 |
#Bonds: 32 | #Rotatable Bonds: 4 | Shape Complexity: 0.47826087 |
Stereocomplexity: 0.13043478 | Ligand Type: Small Molecule |
Binding Affinity |
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Database Name | Value |
Binding MOAD | IC50 : 890 nM |