PDB Entry (5t1a)

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Visualizer: MichelaNGLo

PDB ID: 5t1a Resolution: 2.81 Å Exp. Method: X-RAY DIFFRACTION
PMID: 27926736 DOI: 10.1038/nature20605
Protein
Protein Name: C-C chemokine receptor type 2
Protein Class: SIGNALING PROTEIN
Uniprot ID/ACC: P41597 (CCR2_HUMAN) Organism: Homo sapiens
Gene Symbol: CCR2 Gene ID: 729230
Pocket Descriptors
Volume: 1223.62 Depth: 24.0709
Hydrophobicity: 0.721393 Drug Score: 0.71618
Pocket Similarity: Calculate
Ligand
Ligand Name:   (3S)-1-{(1S,2R,4R)-4-[methyl(propan-2-yl)amino]-2-propylcyclohexyl}-3-{[6-(trifluoromethyl)quinazolin-4-yl]amino}pyrrolidin-2-one
HET ID:   73R PubChem:   68764898
DrugBank:   - ChEMBL:   CHEMBL3577945
Canonical SMILES:   CCC[C@@H]1C[C@@H](CC[C@@H]1N1CC[C@@H](C1=O)Nc1ncnc2c1cc(cc2)C(F)(F)F)N(C(C)C)C
Standard InChI:   InChI=1S/C26H36F3N5O/c1-5-6-17-13-19(33(4)16(2)3)8-10-23(17)34-12-11-22(25(34)35)32-24-20-14-18(26(27,28)29)7-9-21(20)30-15-31-24/h7,9,14-17,19,22-23H,5-6,8,10-13H2,1-4H3,(H,30,31,32)/t17-,19-,22+,23+/m1/s1
Molecular Formula:   C26H36F3N5O Mol. Weight:   491.59216 Heavy Atoms:   35
Charge:   0 Is Chiral:   True logP:   5.3499
HBD:   1 HBA:   6 TPSA:   61.36
#Bonds:   42 #Rotatable Bonds:   8 Shape Complexity:   0.65384614
Stereocomplexity:   0.15384616 Ligand Type:   Small Molecule
Binding Affinity
Database Name Value
BindingDB IC50 : 0.23999999463558197 nM, IC50 : 0.699999988079071 nM, IC50 : 4.699999809265137 nM