PDB Entry (5nau)

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Visualizer: MichelaNGLo

PDB ID: 5nau Resolution: 2.25 Å Exp. Method: X-RAY DIFFRACTION
PMID: 29651884 DOI: 10.1080/14756366.2018.1458030
Protein
Protein Name: Acetylcholinesterase
Protein Class: HYDROLASE
Uniprot ID/ACC: P04058 (ACES_TETCF) Organism: Tetronarce californica
Gene Symbol: - Gene ID: -
Pocket Descriptors
Volume: 743.936 Depth: 19.8879
Hydrophobicity: 0.75 Drug Score: 0.85201
Pocket Similarity: Calculate
Ligand
Ligand Name:   (2~{E})-5-methoxy-2-[[1-(phenylmethyl)piperidin-4-yl]methylidene]-3~{H}-inden-1-one
HET ID:   DZ0 PubChem:   10521609
DrugBank:   - ChEMBL:   CHEMBL3818084
Canonical SMILES:   COc1ccc2c(c1)C/C(=CC1CCN(CC1)Cc1ccccc1)/C2=O
Standard InChI:   InChI=1S/C23H25NO2/c1-26-21-7-8-22-19(15-21)14-20(23(22)25)13-17-9-11-24(12-10-17)16-18-5-3-2-4-6-18/h2-8,13,15,17H,9-12,14,16H2,1H3/b20-13+
Molecular Formula:   C23H25NO2 Mol. Weight:   347.4501 Heavy Atoms:   26
Charge:   0 Is Chiral:   False logP:   4.2105
HBD:   0 HBA:   3 TPSA:   29.54
#Bonds:   29 #Rotatable Bonds:   4 Shape Complexity:   0.3478261
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
Database Name Value
Binding MOAD Ki : 29.860000610351562 nM