PDB Entry (4d6q)

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PDB ID: 4d6q Resolution: 1.29 Å Exp. Method: X-RAY DIFFRACTION
PMID: - DOI: None
Protein
Protein Name: Lysine-specific demethylase 4D
Protein Class: TRANSCRIPTION REGULATOR
Uniprot ID/ACC: Q6B0I6 (KDM4D_HUMAN) Organism: Homo sapiens
Gene Symbol: KDM4D Gene ID: 55693
Pocket Descriptors
Volume: 873.088 Depth: 21.766
Hydrophobicity: 0.685083 Drug Score: 0.606116
Pocket Similarity: Calculate
Ligand
Ligand Name:   PYRIDINE-2,4-DICARBOXYLIC ACID
HET ID:   PD2 PubChem:   10365
DrugBank:   - ChEMBL:   CHEMBL316034
Canonical SMILES:   OC(=O)c1ccnc(c1)C(=O)O
Standard InChI:   InChI=1S/C7H5NO4/c9-6(10)4-1-2-8-5(3-4)7(11)12/h1-3H,(H,9,10)(H,11,12)
Molecular Formula:   C7H5NO4 Mol. Weight:   167.1189 Heavy Atoms:   12
Charge:   0 Is Chiral:   False logP:   0.478
HBD:   2 HBA:   5 TPSA:   87.49
#Bonds:   12 #Rotatable Bonds:   2 Shape Complexity:   0.0
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
-