PDB Entry (3gn0) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 3gn0 | Resolution: 1.7 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 21728378 | DOI: 10.1021/jm200443b | |
Protein |
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Protein Name: Arginase-1 | |
Protein Class: HYDROLASE | |
Uniprot ID/ACC: P05089 (ARGI1_HUMAN) | Organism: Homo sapiens |
Gene Symbol: ARG1 | Gene ID: 383 |
Pocket Descriptors | |
Volume: 199.296 | Depth: 15.9393 |
Hydrophobicity: 0.596774 | Drug Score: 0.396445 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: ALPHA-DIFLUOROMETHYLORNITHINE | ||
HET ID: DMO | PubChem: 550880 | |
DrugBank: DB03856 | ChEMBL: CHEMBL222838 | |
Canonical SMILES: NCCCC(N)C | ||
Standard InChI: InChI=1S/C5H14N2/c1-5(7)3-2-4-6/h5H,2-4,6-7H2,1H3 | ||
Molecular Formula: C5H14N2 | Mol. Weight: 102.17806 | Heavy Atoms: 7 |
Charge: 0 | Is Chiral: True | logP: 1.4731 |
HBD: 2 | HBA: 2 | TPSA: 52.04 |
#Bonds: 6 | #Rotatable Bonds: 3 | Shape Complexity: 1.0 |
Stereocomplexity: 0.2 | Ligand Type: Small Molecule |
Binding Affinity |
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Database Name | Value |
Binding MOAD | Ki : 3900000 nM |