PDB Entry (5lo5)

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Visualizer: MichelaNGLo

PDB ID: 5lo5 Resolution: 1.44 Å Exp. Method: X-RAY DIFFRACTION
PMID: 29768913 DOI: 10.1021/acs.jctc.8b00230
Protein
Protein Name: Heat shock protein HSP 90-alpha
Protein Class: CELL CYCLE
Uniprot ID/ACC: P07900 (HS90A_HUMAN) Organism: Homo sapiens
Gene Symbol: HSP90AA1 Gene ID: 3320
Pocket Descriptors
Volume: 1177.66 Depth: 20.2425
Hydrophobicity: 0.714286 Drug Score: 0.760763
Pocket Similarity: Calculate
Ligand
Ligand Name:   3-[4-[4-(4-cyanophenyl)piperazin-1-yl]butyl]-6-oxidanyl-1~{H}-indole-5-carbonitrile
HET ID:   70M PubChem:   131801398
DrugBank:   - ChEMBL:   -
Canonical SMILES:   N#Cc1ccc(cc1)N1CCN(CC1)CCCCc1c[nH]c2c1cc(C#N)c(c2)O
Standard InChI:   InChI=1S/C24H25N5O/c25-15-18-4-6-21(7-5-18)29-11-9-28(10-12-29)8-2-1-3-19-17-27-23-14-24(30)20(16-26)13-22(19)23/h4-7,13-14,17,27,30H,1-3,8-12H2
Molecular Formula:   C24H25N5O Mol. Weight:   399.4882 Heavy Atoms:   30
Charge:   0 Is Chiral:   False logP:   3.76466
HBD:   2 HBA:   5 TPSA:   90.08
#Bonds:   34 #Rotatable Bonds:   6 Shape Complexity:   0.36363637
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
-