PDB Entry (1lag) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 1lag | Resolution: 2.06 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 7929349 | DOI: None | |
Protein |
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Protein Name: Lysine/arginine/ornithine-binding periplasmic protein | |
Protein Class: TRANSPORTER | |
Uniprot ID/ACC: P02911 (ARGT_SALTY) | Organism: almonella typhimurium |
Gene Symbol: - | Gene ID: 1253877 |
Pocket Descriptors | |
Volume: 569.92 | Depth: 23.3067 |
Hydrophobicity: 0.631868 | Drug Score: 0.168045 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: HISTIDINE | ||
HET ID: HIS | PubChem: 5288559, 5460943, 86580368 | |
DrugBank: - | ChEMBL: CHEMBL1233334 | |
Canonical SMILES: N[C@H](C(=O)O)Cc1c[nH]c[nH+]1 | ||
Standard InChI: InChI=1S/C6H9N3O2/c7-5(6(10)11)1-4-2-8-3-9-4/h2-3,5H,1,7H2,(H,8,9)(H,10,11)/p+1/t5-/m0/s1 | ||
Molecular Formula: C6H10N3O2+ | Mol. Weight: 156.1625 | Heavy Atoms: 11 |
Charge: 1 | Is Chiral: True | logP: -0.5165 |
HBD: 4 | HBA: 3 | TPSA: 93.25 |
#Bonds: 14 | #Rotatable Bonds: 3 | Shape Complexity: 0.33333334 |
Stereocomplexity: 0.16666667 | Ligand Type: Small Molecule |
Binding Affinity |
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Database Name | Value |
PDBBind | Kd : 500 nM |
Binding MOAD | Kd : 500 nM |