PDB Entry (5acm)

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Visualizer: MichelaNGLo

PDB ID: 5acm Resolution: 1.05 Å Exp. Method: X-RAY DIFFRACTION
PMID: 26576950 DOI: 10.7554/eLife.10935
Protein
Protein Name: Immunoglobulin lambda variable 2-8
Protein Class: ANTIBODY
Uniprot ID/ACC: P01709 (LV208_HUMAN) Organism: Homo sapiens
Gene Symbol: - Gene ID: -
Pocket Descriptors
Volume: 323.84 Depth: 16.3365
Hydrophobicity: 0.819672 Drug Score: 0.922097
Pocket Similarity: Calculate
Ligand
Ligand Name:   3,7-BIS(DIMETHYLAMINO)PHENOTHIAZIN-5-IUM
HET ID:   MBT PubChem:   4139
DrugBank:   DB08167 ChEMBL:   CHEMBL191083
Canonical SMILES:   CN(c1ccc2c(c1)[s+]c1c(n2)ccc(c1)N(C)C)C
Standard InChI:   InChI=1S/C16H18N3S/c1-18(2)11-5-7-13-15(9-11)20-16-10-12(19(3)4)6-8-14(16)17-13/h5-10H,1-4H3/q+1
Molecular Formula:   C16H18N3S+ Mol. Weight:   284.39923 Heavy Atoms:   20
Charge:   1 Is Chiral:   False logP:   3.8626
HBD:   0 HBA:   4 TPSA:   47.61
#Bonds:   22 #Rotatable Bonds:   2 Shape Complexity:   0.25
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
-