PDB Entry (4cg8)

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Visualizer: MichelaNGLo

PDB ID: 4cg8 Resolution: 1.75 Å Exp. Method: X-RAY DIFFRACTION
PMID: 24387243 DOI: 10.1021/jm401665x
Protein
Protein Name: Choline kinase alpha
Protein Class: TRANSFERASE
Uniprot ID/ACC: P35790 (CHKA_HUMAN) Organism: Homo sapiens
Gene Symbol: CHKA Gene ID: 1119
Pocket Descriptors
Volume: 262.208 Depth: 10.198
Hydrophobicity: 0.771429 Drug Score: 0.758864
Pocket Similarity: Calculate
Ligand
Ligand Name:   4-[(4-chlorophenyl)(methyl)amino]-1-{4-[4-(4-{[4-(dimethylamino)pyridinium-1-yl]methyl}phenyl)butyl]benzyl}pyridinium
HET ID:   G8S PubChem:   72699171
DrugBank:   - ChEMBL:   CHEMBL3140256
Canonical SMILES:   Clc1ccc(cc1)N(c1cc[n+](cc1)Cc1ccc(cc1)CCCCc1ccc(cc1)C[n+]1ccc(cc1)N(C)C)C
Standard InChI:   InChI=1S/C37H41ClN4/c1-39(2)35-20-24-41(25-21-35)28-32-12-8-30(9-13-32)6-4-5-7-31-10-14-33(15-11-31)29-42-26-22-37(23-27-42)40(3)36-18-16-34(38)17-19-36/h8-27H,4-7,28-29H2,1-3H3/q+2
Molecular Formula:   C37H41ClN4++ Mol. Weight:   577.20123 Heavy Atoms:   42
Charge:   2 Is Chiral:   False logP:   7.4109
HBD:   0 HBA:   1 TPSA:   14.24
#Bonds:   46 #Rotatable Bonds:   12 Shape Complexity:   0.24324325
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
Database Name Value
Binding MOAD IC50 : 1200 nM