PDB Entry (4br3) Download |
||
Visualizer: MichelaNGLo |
||
PDB ID: 4br3 | Resolution: 2.2 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 23813777 | DOI: 10.1002/cbic.201300195 | |
Protein |
|
Protein Name: Choline kinase alpha | |
Protein Class: TRANSFERASE | |
Uniprot ID/ACC: P35790 (CHKA_HUMAN) | Organism: Homo sapiens |
Gene Symbol: CHKA | Gene ID: 1119 |
Pocket Descriptors | |
Volume: 158.016 | Depth: 16.7668 |
Hydrophobicity: 0.8125 | Drug Score: 0.398513 |
Pocket Similarity: Calculate |
Ligand |
||
Ligand Name: 1-((4'-((6-amino-3H-purin-3-yl)methyl)biphenyl-4-yl)methyl)-4-(dimethylamino)pyridinium | ||
HET ID: U85 | PubChem: 57391758, 136098581 | |
DrugBank: - | ChEMBL: CHEMBL1963130 | |
Canonical SMILES: CN(c1cc[n+](cc1)Cc1ccc(cc1)c1ccc(cc1)Cn1cnc(c2c1ncn2)N)C | ||
Standard InChI: InChI=1S/C26H26N7/c1-31(2)23-11-13-32(14-12-23)15-19-3-7-21(8-4-19)22-9-5-20(6-10-22)16-33-18-30-25(27)24-26(33)29-17-28-24/h3-14,17-18H,15-16,27H2,1-2H3/q+1 | ||
Molecular Formula: C26H26N7+ | Mol. Weight: 436.53156 | Heavy Atoms: 33 |
Charge: 1 | Is Chiral: False | logP: 4.1068 |
HBD: 1 | HBA: 6 | TPSA: 76.74 |
#Bonds: 37 | #Rotatable Bonds: 6 | Shape Complexity: 0.15384616 |
Stereocomplexity: 0.0 | Ligand Type: Small Molecule |
Binding Affinity |
|
Database Name | Value |
PDBBind | Kd : 1900 nM |
Binding MOAD | Kd : 1900 nM |