PDB Entry (4cg9)

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Visualizer: MichelaNGLo

PDB ID: 4cg9 Resolution: 1.83 Å Exp. Method: X-RAY DIFFRACTION
PMID: 24387243 DOI: 10.1021/jm401665x
Protein
Protein Name: Choline kinase alpha
Protein Class: TRANSFERASE
Uniprot ID/ACC: P35790 (CHKA_HUMAN) Organism: Homo sapiens
Gene Symbol: CHKA Gene ID: 1119
Pocket Descriptors
Volume: 361.28 Depth: 11.9398
Hydrophobicity: 0.75641 Drug Score: 0.567973
Pocket Similarity: Calculate
Ligand
Ligand Name:   N,N-dimethyl-1-[(4-phenylphenyl)methyl]pyridin-1-ium-4-amine
HET ID:   GQG PubChem:   8865270
DrugBank:   - ChEMBL:   -
Canonical SMILES:   CN(c1cc[n+](cc1)Cc1ccc(cc1)c1ccccc1)C
Standard InChI:   InChI=1S/C20H21N2/c1-21(2)20-12-14-22(15-13-20)16-17-8-10-19(11-9-17)18-6-4-3-5-7-18/h3-15H,16H2,1-2H3/q+1
Molecular Formula:   C20H21N2+ Mol. Weight:   289.39413 Heavy Atoms:   22
Charge:   1 Is Chiral:   False logP:   3.7554
HBD:   0 HBA:   1 TPSA:   7.12
#Bonds:   24 #Rotatable Bonds:   4 Shape Complexity:   0.15
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
-