PDB Entry (5x71)

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PDB ID: 5x71 Resolution: 2.57 Å Exp. Method: X-RAY DIFFRACTION
PMID: - DOI: None
Protein
Protein Name: Putative mRNA-capping enzyme P5
Protein Class: VIRAL PROTEIN
Uniprot ID/ACC: P14583 (MCE_RDVA) Organism: Rice dwarf virus
Gene Symbol: - Gene ID: -
Pocket Descriptors
Volume: 121.728 Depth: 15.2535
Hydrophobicity: 0.704348 Drug Score: 0.048311
Pocket Similarity: Calculate
Ligand
Ligand Name:   GUANOSINE-5'-MONOPHOSPHATE
HET ID:   5GP PubChem:   135398631
DrugBank:   DB01972 ChEMBL:   CHEMBL283807
Canonical SMILES:   O[C@@H]1[C@H](O)[C@H](O[C@H]1n1cnc2c1nc(N)[nH]c2=O)COP(=O)(O)O
Standard InChI:   InChI=1S/C10H14N5O8P/c11-10-13-7-4(8(18)14-10)12-2-15(7)9-6(17)5(16)3(23-9)1-22-24(19,20)21/h2-3,5-6,9,16-17H,1H2,(H2,19,20,21)(H3,11,13,14,18)/t3-,5-,6-,9-/m1/s1
Molecular Formula:   C10H14N5O8P Mol. Weight:   363.2206 Heavy Atoms:   24
Charge:   0 Is Chiral:   True logP:   -1.9885
HBD:   6 HBA:   12 TPSA:   215.85
#Bonds:   31 #Rotatable Bonds:   4 Shape Complexity:   0.5
Stereocomplexity:   0.4 Ligand Type:   Small Molecule
Binding Affinity
-