PDB Entry (4mm6) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 4mm6 | Resolution: 3.1 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 24121440 | DOI: 10.1038/nature12648 | |
Protein |
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Protein Name: Na(+):neurotransmitter symporter (Snf family) | |
Protein Class: TRANSPORTER | |
Uniprot ID/ACC: O67854 (O67854_AQUAE) | Organism: Aquifex aeolicus |
Gene Symbol: - | Gene ID: - |
Pocket Descriptors | |
Volume: 987.968 | Depth: 26.1381 |
Hydrophobicity: 0.718254 | Drug Score: 0.488141 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: (3S)-N-methyl-3-(naphthalen-1-yloxy)-3-(thiophen-2-yl)propan-1-amine | ||
HET ID: 29E | PubChem: 60835 | |
DrugBank: DB00476 | ChEMBL: CHEMBL1175 | |
Canonical SMILES: CNCC[C@@H](c1cccs1)Oc1cccc2c1cccc2 | ||
Standard InChI: InChI=1S/C18H19NOS/c1-19-12-11-17(18-10-5-13-21-18)20-16-9-4-7-14-6-2-3-8-15(14)16/h2-10,13,17,19H,11-12H2,1H3/t17-/m0/s1 | ||
Molecular Formula: C18H19NOS | Mol. Weight: 297.41455 | Heavy Atoms: 21 |
Charge: 0 | Is Chiral: True | logP: 5.0218 |
HBD: 1 | HBA: 3 | TPSA: 49.5 |
#Bonds: 24 | #Rotatable Bonds: 6 | Shape Complexity: 0.22222222 |
Stereocomplexity: 0.055555556 | Ligand Type: Small Molecule |
Binding Affinity |
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Database Name | Value |
PDBBind | Ki : 205 nM |