PDB Entry (4kys)

Download

Visualizer: MichelaNGLo

PDB ID: 4kys Resolution: 2.18 Å Exp. Method: X-RAY DIFFRACTION
PMID: 24079939 DOI: 10.1021/bi400841g
Protein
Protein Name: Thiamine pyridinylase I
Protein Class: SIGNALING PROTEIN
Uniprot ID/ACC: - Organism: Clostridium botulinum A str. ATCC 19397
Gene Symbol: - Gene ID: -
Pocket Descriptors
Volume: 929.344 Depth: 20.6319
Hydrophobicity: 0.719424 Drug Score: 0.828032
Pocket Similarity: Calculate
Ligand
Ligand Name:   3-(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-5-(2-HYDROXY-ETHYL)-4-METHYL-THIAZOL-3-IUM
HET ID:   VIB PubChem:   1130
DrugBank:   DB00152 ChEMBL:   CHEMBL1547
Canonical SMILES:   OCCc1sc[n+](c1C)Cc1cnc(nc1N)C
Standard InChI:   InChI=1S/C12H17N4OS/c1-8-11(3-4-17)18-7-16(8)6-10-5-14-9(2)15-12(10)13/h5,7,17H,3-4,6H2,1-2H3,(H2,13,14,15)/q+1
Molecular Formula:   C12H17N4OS+ Mol. Weight:   265.35458 Heavy Atoms:   18
Charge:   1 Is Chiral:   False logP:   1.1889
HBD:   2 HBA:   5 TPSA:   104.15
#Bonds:   19 #Rotatable Bonds:   4 Shape Complexity:   0.41666666
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
-