PDB Entry (3nvy)

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Visualizer: MichelaNGLo

PDB ID: 3nvy Resolution: 2.0 Å Exp. Method: X-RAY DIFFRACTION
PMID: 25060641 DOI: 10.1021/np500320g
Protein
Protein Name: Xanthine dehydrogenase/oxidase
Protein Class: OXIDOREDUCTASE
Uniprot ID/ACC: P80457 (XDH_BOVIN) Organism: Bos taurus
Gene Symbol: XDH Gene ID: 280960
Pocket Descriptors
Volume: 229.44 Depth: 28.8151
Hydrophobicity: 0.661808 Drug Score: 0.00815799
Pocket Similarity: Calculate
Ligand
Ligand Name:   3,5,7,3',4'-PENTAHYDROXYFLAVONE
HET ID:   QUE PubChem:   5280343
DrugBank:   DB04216 ChEMBL:   CHEMBL50
Canonical SMILES:   Oc1cc(O)c2c(c1)oc(c(c2=O)O)c1ccc(c(c1)O)O
Standard InChI:   InChI=1S/C15H10O7/c16-7-4-10(19)12-11(5-7)22-15(14(21)13(12)20)6-1-2-8(17)9(18)3-6/h1-5,16-19,21H
Molecular Formula:   C15H10O7 Mol. Weight:   302.2357 Heavy Atoms:   22
Charge:   0 Is Chiral:   False logP:   1.988
HBD:   5 HBA:   7 TPSA:   131.36
#Bonds:   24 #Rotatable Bonds:   1 Shape Complexity:   0.0
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
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