|
PDB Entry (3nvy) Download |
||
|
Visualizer: MichelaNGLo 3nvy_QUE_1356_C |
||
| PDB ID: 3nvy | Resolution: 2.0 Å | Exp. Method: X-RAY DIFFRACTION |
| PMID: 25060641 | DOI: 10.1021/np500320g | |
Protein |
|
| Protein Name: Xanthine dehydrogenase/oxidase | |
| Protein Class: OXIDOREDUCTASE | |
| Uniprot ID/ACC: P80457 (XDH_BOVIN) | Organism: Bos taurus |
| Gene Symbol: XDH | Gene ID: 280960 |
Pocket Descriptors | |
| Volume: 229.44 | Depth: 28.8151 |
| Hydrophobicity: 0.661808 | Drug Score: 0.00815799 |
| Pocket Similarity: Calculate | |
Ligand |
||
| | ||
| Ligand Name: 3,5,7,3',4'-PENTAHYDROXYFLAVONE | ||
| HET ID: QUE | PubChem: 5280343 | |
| DrugBank: DB04216 | ChEMBL: CHEMBL50 | |
| Canonical SMILES: Oc1cc(O)c2c(c1)oc(c(c2=O)O)c1ccc(c(c1)O)O | ||
| Standard InChI: InChI=1S/C15H10O7/c16-7-4-10(19)12-11(5-7)22-15(14(21)13(12)20)6-1-2-8(17)9(18)3-6/h1-5,16-19,21H | ||
| Molecular Formula: C15H10O7 | Mol. Weight: 302.2357 | Heavy Atoms: 22 |
| Charge: 0 | Is Chiral: False | logP: 1.988 |
| HBD: 5 | HBA: 7 | TPSA: 131.36 |
| #Bonds: 24 | #Rotatable Bonds: 1 | Shape Complexity: 0.0 |
| Stereocomplexity: 0.0 | Ligand Type: Small Molecule | |
Binding Affinity |
||
- |