PDB Entry (3ix1) Download |
||
Visualizer: MichelaNGLo |
||
PDB ID: 3ix1 | Resolution: 2.4 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 20873853 | DOI: 10.1021/bi101209t | |
Protein |
|
Protein Name: Formylaminopyrimidine-binding protein | |
Protein Class: TRANSPORTER | |
Uniprot ID/ACC: Q9K9G5 (THIY_BACHD) | Organism: Bacillus halodurans |
Gene Symbol: - | Gene ID: - |
Pocket Descriptors | |
Volume: 713.728 | Depth: 23.8401 |
Hydrophobicity: 0.745192 | Drug Score: 0.415878 |
Pocket Similarity: Calculate |
Ligand |
||
Ligand Name: N-[(4-amino-2-methylpyrimidin-5-yl)methyl]formamide | ||
HET ID: NFM | PubChem: 597195 | |
DrugBank: - | ChEMBL: CHEMBL1234697 | |
Canonical SMILES: O=CNCc1cnc(nc1N)C | ||
Standard InChI: InChI=1S/C7H10N4O/c1-5-10-3-6(2-9-4-12)7(8)11-5/h3-4H,2H2,1H3,(H,9,12)(H2,8,10,11) | ||
Molecular Formula: C7H10N4O | Mol. Weight: 166.1805 | Heavy Atoms: 12 |
Charge: 0 | Is Chiral: False | logP: 1.2212 |
HBD: 2 | HBA: 5 | TPSA: 80.9 |
#Bonds: 12 | #Rotatable Bonds: 3 | Shape Complexity: 0.2857143 |
Stereocomplexity: 0.0 | Ligand Type: Small Molecule |
Binding Affinity |
|
Database Name | Value |
Binding MOAD | Kd : 200 nM |