PDB Entry (2yke) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 2yke | Resolution: 1.43 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 21972823 | DOI: 10.1021/jm200784m | |
Protein |
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Protein Name: Heat shock protein HSP 90-alpha | |
Protein Class: CELL CYCLE | |
Uniprot ID/ACC: P07900 (HS90A_HUMAN) | Organism: Homo sapiens |
Gene Symbol: HSP90AA1 | Gene ID: 3320 |
Pocket Descriptors | |
Volume: 1058.43 | Depth: 26.7791 |
Hydrophobicity: 0.70283 | Drug Score: 0.668433 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: N-[(4R)-4-(3H-imidazo[4,5-c]pyridin-2-yl)-4H-fluoren-9-yl]quinoline-5-carboxamide | ||
HET ID: YKE | PubChem: 137350193 | |
DrugBank: - | ChEMBL: - | |
Canonical SMILES: O=C(c1cccc2c1cccn2)NC1=c2ccccc2=C2C1=CC=CC2c1nc2c([nH]1)cncc2 | ||
Standard InChI: InChI=1S/C29H19N5O/c35-29(20-8-4-12-23-17(20)11-5-14-31-23)34-27-19-7-2-1-6-18(19)26-21(27)9-3-10-22(26)28-32-24-13-15-30-16-25(24)33-28/h1-16,22H,(H,32,33)(H,34,35) | ||
Molecular Formula: C29H19N5O | Mol. Weight: 453.49405 | Heavy Atoms: 35 |
Charge: 0 | Is Chiral: True | logP: 3.8795 |
HBD: 2 | HBA: 5 | TPSA: 83.56 |
#Bonds: 42 | #Rotatable Bonds: 4 | Shape Complexity: 0.03448276 |
Stereocomplexity: 0.03448276 | Ligand Type: Small Molecule |
Binding Affinity |
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Database Name | Value |
PDBBind | IC50 : 1100 nM |