PDB Entry (1v2k) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 1v2k | Resolution: 2.0 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 14729347 | DOI: 10.1016/j.jmb.2003.11.041 | |
Protein |
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Protein Name: Cationic trypsin | |
Protein Class: HYDROLASE | |
Uniprot ID/ACC: P00760 (TRY1_BOVIN) | Organism: Bos taurus |
Gene Symbol: - | Gene ID: 615026 |
Pocket Descriptors | |
Volume: 527.552 | Depth: 20.3882 |
Hydrophobicity: 0.684211 | Drug Score: 0.0827825 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: [4-(6-CHLORO-NAPHTHALENE-2-SULFONYL)-PIPERAZIN-1-YL]- (3,4,5,6-TETRAHYDRO-2H-[1,4']BIPYRIDINYL-4-YL)- METHANONE | ||
HET ID: ZEN | PubChem: 446399 | |
DrugBank: DB01836 | ChEMBL: CHEMBL270527 | |
Canonical SMILES: Clc1ccc2c(c1)ccc(c2)S(=O)(=O)N1CCN(CC1)C(=O)C1CCN(CC1)c1ccncc1 | ||
Standard InChI: InChI=1S/C25H27ClN4O3S/c26-22-3-1-21-18-24(4-2-20(21)17-22)34(32,33)30-15-13-29(14-16-30)25(31)19-7-11-28(12-8-19)23-5-9-27-10-6-23/h1-6,9-10,17-19H,7-8,11-16H2 | ||
Molecular Formula: C25H27ClN4O3S | Mol. Weight: 499.02487 | Heavy Atoms: 34 |
Charge: 0 | Is Chiral: False | logP: 4.6593 |
HBD: 0 | HBA: 7 | TPSA: 82.2 |
#Bonds: 38 | #Rotatable Bonds: 5 | Shape Complexity: 0.36 |
Stereocomplexity: 0.0 | Ligand Type: Small Molecule |
Binding Affinity |
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Database Name | Value |
BindingDB | Ki : 650 nM |
Binding MOAD | Ki : 650 nM |