PDB Entry (1rmy) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 1rmy | Resolution: 1.75 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: - | DOI: None | |
Protein |
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Protein Name: Class B acid phosphatase | |
Protein Class: HYDROLASE | |
Uniprot ID/ACC: P0AE22 (APHA_ECOLI) | Organism: Escherichia coli |
Gene Symbol: - | Gene ID: 48133102 |
Pocket Descriptors | |
Volume: 596.288 | Depth: 17.1767 |
Hydrophobicity: 0.615385 | Drug Score: 0.556314 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: 2'-DEOXYCYTIDINE | ||
HET ID: DCZ | PubChem: 13711 | |
DrugBank: DB02594 | ChEMBL: CHEMBL66115 | |
Canonical SMILES: OC[C@H]1O[C@H](C[C@@H]1O)n1ccc(nc1=O)N | ||
Standard InChI: InChI=1S/C9H13N3O4/c10-7-1-2-12(9(15)11-7)8-3-5(14)6(4-13)16-8/h1-2,5-6,8,13-14H,3-4H2,(H2,10,11,15)/t5-,6+,8+/m0/s1 | ||
Molecular Formula: C9H13N3O4 | Mol. Weight: 227.21722 | Heavy Atoms: 16 |
Charge: 0 | Is Chiral: True | logP: -0.9526 |
HBD: 3 | HBA: 7 | TPSA: 110.6 |
#Bonds: 20 | #Rotatable Bonds: 2 | Shape Complexity: 0.5555556 |
Stereocomplexity: 0.33333334 | Ligand Type: Small Molecule |
Binding Affinity |
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