PDB Entry (1c8k)

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Visualizer: MichelaNGLo

PDB ID: 1c8k Resolution: 1.76 Å Exp. Method: X-RAY DIFFRACTION
PMID: 10924512 DOI: 10.1074/jbc.M004485200
Protein
Protein Name: Glycogen phosphorylase, muscle form
Protein Class: TRANSFERASE
Uniprot ID/ACC: P00489 (PYGM_RABIT) Organism: Oryctolagus cuniculus
Gene Symbol: - Gene ID: 100008972
Pocket Descriptors
Volume: 147.904 Depth: 12.9608
Hydrophobicity: 0.741573 Drug Score: 0.222728
Pocket Similarity: Calculate
Ligand
Ligand Name:   2-(2-CHLORO-PHENYL)-5,7-DIHYDROXY-8-(3-HYDROXY-1-METHYL-PIPERIDIN-4-YL)-4H-BENZOPYRAN-4-ONE
HET ID:   CPB PubChem:   5287969
DrugBank:   DB03496 ChEMBL:   CHEMBL428690
Canonical SMILES:   CN1CC[C@@H]([C@@H](C1)O)c1c(O)cc(c2c1oc(cc2=O)c1ccccc1Cl)O
Standard InChI:   InChI=1S/C21H20ClNO5/c1-23-7-6-12(17(27)10-23)19-14(24)8-15(25)20-16(26)9-18(28-21(19)20)11-4-2-3-5-13(11)22/h2-5,8-9,12,17,24-25,27H,6-7,10H2,1H3/t12-,17+/m0/s1
Molecular Formula:   C21H20ClNO5 Mol. Weight:   401.8402 Heavy Atoms:   28
Charge:   0 Is Chiral:   True logP:   3.2425
HBD:   3 HBA:   6 TPSA:   94.14
#Bonds:   33 #Rotatable Bonds:   2 Shape Complexity:   0.2857143
Stereocomplexity:   0.0952381 Ligand Type:   Small Molecule
Binding Affinity
Database Name Value
PDBBind IC50 : 1000 nM
Binding MOAD IC50 : 1000 nM