PDB Entry (1s1v)

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Visualizer: MichelaNGLo

PDB ID: 1s1v Resolution: 2.6 Å Exp. Method: X-RAY DIFFRACTION
PMID: 15095972 DOI: 10.1016/j.jmb.2003.12.055
Protein
Protein Name: Reverse transcriptase
Protein Class: VIRAL PROTEIN
Uniprot ID/ACC: P04585 (POL_HV1H2) Organism: Human immunodeficiency virus type 1 group M subtype B
Gene Symbol: - Gene ID: 155348
Pocket Descriptors
Volume: 269.312 Depth: 20.5735
Hydrophobicity: 0.765363 Drug Score: 0.0445586
Pocket Similarity: Calculate
Ligand
Ligand Name:   6-BENZYL-1-BENZYLOXYMETHYL-5-ISOPROPYL URACIL
HET ID:   TNK PubChem:   446515
DrugBank:   DB08634 ChEMBL:   CHEMBL436546
Canonical SMILES:   CC(c1c(=O)[nH]c(=O)n(c1Cc1ccccc1)COCc1ccccc1)C
Standard InChI:   InChI=1S/C22H24N2O3/c1-16(2)20-19(13-17-9-5-3-6-10-17)24(22(26)23-21(20)25)15-27-14-18-11-7-4-8-12-18/h3-12,16H,13-15H2,1-2H3,(H,23,25,26)
Molecular Formula:   C22H24N2O3 Mol. Weight:   364.43756 Heavy Atoms:   27
Charge:   0 Is Chiral:   False logP:   3.4251
HBD:   1 HBA:   4 TPSA:   64.09
#Bonds:   30 #Rotatable Bonds:   7 Shape Complexity:   0.27272728
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
Database Name Value
BindingDB IC50 : 6 nM