PDB Entry (1s1v) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 1s1v | Resolution: 2.6 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 15095972 | DOI: 10.1016/j.jmb.2003.12.055 | |
Protein |
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Protein Name: Reverse transcriptase | |
Protein Class: VIRAL PROTEIN | |
Uniprot ID/ACC: P04585 (POL_HV1H2) | Organism: Human immunodeficiency virus type 1 group M subtype B |
Gene Symbol: - | Gene ID: 155348 |
Pocket Descriptors | |
Volume: 269.312 | Depth: 20.5735 |
Hydrophobicity: 0.765363 | Drug Score: 0.0445586 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: 6-BENZYL-1-BENZYLOXYMETHYL-5-ISOPROPYL URACIL | ||
HET ID: TNK | PubChem: 446515 | |
DrugBank: DB08634 | ChEMBL: CHEMBL436546 | |
Canonical SMILES: CC(c1c(=O)[nH]c(=O)n(c1Cc1ccccc1)COCc1ccccc1)C | ||
Standard InChI: InChI=1S/C22H24N2O3/c1-16(2)20-19(13-17-9-5-3-6-10-17)24(22(26)23-21(20)25)15-27-14-18-11-7-4-8-12-18/h3-12,16H,13-15H2,1-2H3,(H,23,25,26) | ||
Molecular Formula: C22H24N2O3 | Mol. Weight: 364.43756 | Heavy Atoms: 27 |
Charge: 0 | Is Chiral: False | logP: 3.4251 |
HBD: 1 | HBA: 4 | TPSA: 64.09 |
#Bonds: 30 | #Rotatable Bonds: 7 | Shape Complexity: 0.27272728 |
Stereocomplexity: 0.0 | Ligand Type: Small Molecule |
Binding Affinity |
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Database Name | Value |
BindingDB | IC50 : 6 nM |