PDB Entry (4h2g) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 4h2g | Resolution: 1.55 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 23142347 | DOI: 10.1016/j.str.2012.10.001 | |
Protein |
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Protein Name: 5'-nucleotidase | |
Protein Class: TRANSFERASE | |
Uniprot ID/ACC: P21589 (5NTD_HUMAN) | Organism: Homo sapiens |
Gene Symbol: NT5E | Gene ID: 4907 |
Pocket Descriptors | |
Volume: 231.872 | Depth: 15.5567 |
Hydrophobicity: 0.697674 | Drug Score: 0.108559 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: ADENOSINE | ||
HET ID: ADN | PubChem: 60961 | |
DrugBank: DB00640 | ChEMBL: CHEMBL477 | |
Canonical SMILES: OC[C@H]1O[C@H]([C@@H]([C@@H]1O)O)n1cnc2c1ncnc2N | ||
Standard InChI: InChI=1S/C10H13N5O4/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(18)6(17)4(1-16)19-10/h2-4,6-7,10,16-18H,1H2,(H2,11,12,13)/t4-,6-,7-,10-/m1/s1 | ||
Molecular Formula: C10H13N5O4 | Mol. Weight: 267.24133 | Heavy Atoms: 19 |
Charge: 0 | Is Chiral: True | logP: -1.3988 |
HBD: 4 | HBA: 9 | TPSA: 139.54 |
#Bonds: 25 | #Rotatable Bonds: 2 | Shape Complexity: 0.5 |
Stereocomplexity: 0.4 | Ligand Type: Small Molecule |
Binding Affinity |
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