PDB Entry (4h2g)

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Visualizer: MichelaNGLo

PDB ID: 4h2g Resolution: 1.55 Å Exp. Method: X-RAY DIFFRACTION
PMID: 23142347 DOI: 10.1016/j.str.2012.10.001
Protein
Protein Name: 5'-nucleotidase
Protein Class: TRANSFERASE
Uniprot ID/ACC: P21589 (5NTD_HUMAN) Organism: Homo sapiens
Gene Symbol: NT5E Gene ID: 4907
Pocket Descriptors
Volume: 231.872 Depth: 15.5567
Hydrophobicity: 0.697674 Drug Score: 0.108559
Pocket Similarity: Calculate
Ligand
Ligand Name:   ADENOSINE
HET ID:   ADN PubChem:   60961
DrugBank:   DB00640 ChEMBL:   CHEMBL477
Canonical SMILES:   OC[C@H]1O[C@H]([C@@H]([C@@H]1O)O)n1cnc2c1ncnc2N
Standard InChI:   InChI=1S/C10H13N5O4/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(18)6(17)4(1-16)19-10/h2-4,6-7,10,16-18H,1H2,(H2,11,12,13)/t4-,6-,7-,10-/m1/s1
Molecular Formula:   C10H13N5O4 Mol. Weight:   267.24133 Heavy Atoms:   19
Charge:   0 Is Chiral:   True logP:   -1.3988
HBD:   4 HBA:   9 TPSA:   139.54
#Bonds:   25 #Rotatable Bonds:   2 Shape Complexity:   0.5
Stereocomplexity:   0.4 Ligand Type:   Small Molecule
Binding Affinity
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