PDB Entry (6hh5)

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Visualizer: MichelaNGLo

PDB ID: 6hh5 Resolution: 1.95 Å Exp. Method: X-RAY DIFFRACTION
PMID: 30472116 DOI: 10.1016/j.chembiol.2018.11.001
Protein
Protein Name: ADP-ribose glycohydrolase ARH3
Protein Class: HYDROLASE
Uniprot ID/ACC: H3BCW1 (ADPRS_LATCH) Organism: Latimeria chalumnae
Gene Symbol: - Gene ID: 102353686
Pocket Descriptors
Volume: 892.096 Depth: 27.7039
Hydrophobicity: 0.666667 Drug Score: 0.513821
Pocket Similarity: Calculate
Ligand
Ligand Name:   Adenosine Diphosphate (Hydroxymethyl)pyrrolidine monoalcohol
HET ID:   A3R PubChem:   10951514
DrugBank:   - ChEMBL:   -
Canonical SMILES:   O[C@H]1CN[C@@H](C1)CO[P@](=O)(O[P@](=O)(OC[C@H]1O[C@H]([C@@H]([C@@H]1O)O)n1cnc2c1ncnc2N)O)O
Standard InChI:   InChI=1S/C15H24N6O11P2/c16-13-10-14(19-5-18-13)21(6-20-10)15-12(24)11(23)9(31-15)4-30-34(27,28)32-33(25,26)29-3-7-1-8(22)2-17-7/h5-9,11-12,15,17,22-24H,1-4H2,(H,25,26)(H,27,28)(H2,16,18,19)/t7-,8+,9+,11+,12+,15+/m0/s1
Molecular Formula:   C15H24N6O11P2 Mol. Weight:   526.33215 Heavy Atoms:   34
Charge:   0 Is Chiral:   True logP:   -1.0889
HBD:   7 HBA:   17 TPSA:   273.48
#Bonds:   43 #Rotatable Bonds:   9 Shape Complexity:   0.6666667
Stereocomplexity:   0.53333336 Ligand Type:   Small Molecule
Binding Affinity
-