PDB Entry (4eji)

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Visualizer: MichelaNGLo

PDB ID: 4eji Resolution: 2.1 Å Exp. Method: X-RAY DIFFRACTION
PMID: 22700965 DOI: 10.1074/jbc.M112.372813
Protein
Protein Name: Cytochrome P450 2A13
Protein Class: OXIDOREDUCTASE
Uniprot ID/ACC: Q16696 (CP2AD_HUMAN) Organism: Homo sapiens
Gene Symbol: CYP2A13 Gene ID: 1553
Pocket Descriptors
Volume: 2136.77 Depth: 35.7592
Hydrophobicity: 0.704883 Drug Score: 0.999999
Pocket Similarity: Calculate
Ligand
Ligand Name:   4-[methyl(nitroso)amino]-1-(pyridin-3-yl)butan-1-one
HET ID:   0QA PubChem:   47289
DrugBank:   - ChEMBL:   CHEMBL2311069
Canonical SMILES:   O=NN(CCCC(=O)c1cccnc1)C
Standard InChI:   InChI=1S/C10H13N3O2/c1-13(12-15)7-3-5-10(14)9-4-2-6-11-8-9/h2,4,6,8H,3,5,7H2,1H3
Molecular Formula:   C10H13N3O2 Mol. Weight:   207.22913 Heavy Atoms:   15
Charge:   0 Is Chiral:   False logP:   1.6577
HBD:   0 HBA:   5 TPSA:   62.63
#Bonds:   15 #Rotatable Bonds:   6 Shape Complexity:   0.4
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
Database Name Value
Binding MOAD Kd : 4400 nM