PDB Entry (2gg2)

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Visualizer: MichelaNGLo

PDB ID: 2gg2 Resolution: 1.0 Å Exp. Method: X-RAY DIFFRACTION
PMID: 17120228 DOI: 10.1002/prot.21207
Protein
Protein Name: Methionine aminopeptidase
Protein Class: HYDROLASE
Uniprot ID/ACC: P0AE18 (MAP1_ECOLI) Organism: Escherichia coli
Gene Symbol: - Gene ID: 49586016
Pocket Descriptors
Volume: 881.536 Depth: 20.2307
Hydrophobicity: 0.666667 Drug Score: 0.518507
Pocket Similarity: Calculate
Ligand
Ligand Name:   5-IMINO-4-(3-TRIFLUOROMETHYL-PHENYLAZO)-5H-PYRAZOL-3-YLAMINE
HET ID:   U12 PubChem:   11840988
DrugBank:   DB08666 ChEMBL:   CHEMBL1615262
Canonical SMILES:   NC1=C(/N=N/c2cccc(c2)C(F)(F)F)C(=N)N=N1
Standard InChI:   InChI=1S/C10H7F3N6/c11-10(12,13)5-2-1-3-6(4-5)16-17-7-8(14)18-19-9(7)15/h1-4,14H,15H2/b14-8?,17-16+
Molecular Formula:   C10H7F3N6 Mol. Weight:   268.198 Heavy Atoms:   19
Charge:   0 Is Chiral:   False logP:   3.0312
HBD:   2 HBA:   6 TPSA:   99.31
#Bonds:   20 #Rotatable Bonds:   3 Shape Complexity:   0.1
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
Database Name Value
PDBBind IC50 : 250 nM
BindingDB IC50 : 250 nM
Binding MOAD IC50 : 250 nM