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PDB Entry (2pcp) Download |
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Visualizer: MichelaNGLo |
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| PDB ID: 2pcp | Resolution: 2.2 Å | Exp. Method: X-RAY DIFFRACTION |
| PMID: 9786848 | DOI: 10.1074/jbc.273.44.28576 | |
Protein |
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| Protein Name: Monoclonal 6B5 Fab | |
| Protein Class: ANTIBODY | |
| Uniprot ID/ACC: - | Organism: Mus musculus |
| Gene Symbol: - | Gene ID: - |
Pocket Descriptors | |
| Volume: 137.088 | Depth: 15.0336 |
| Hydrophobicity: 0.717557 | Drug Score: 0.0171002 |
| Pocket Similarity: Calculate | |
Ligand |
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| Ligand Name: 1-(PHENYL-1-CYCLOHEXYL)PIPERIDINE | ||
| HET ID: 1PC | PubChem: 6468 | |
| DrugBank: DB03575 | ChEMBL: CHEMBL275528 | |
| Canonical SMILES: C1CCC(CC1)(N1CCCCC1)c1ccccc1 | ||
| Standard InChI: InChI=1S/C17H25N/c1-4-10-16(11-5-1)17(12-6-2-7-13-17)18-14-8-3-9-15-18/h1,4-5,10-11H,2-3,6-9,12-15H2 | ||
| Molecular Formula: C17H25N | Mol. Weight: 243.3871 | Heavy Atoms: 18 |
| Charge: 0 | Is Chiral: False | logP: 4.2698 |
| HBD: 0 | HBA: 1 | TPSA: 3.24 |
| #Bonds: 20 | #Rotatable Bonds: 2 | Shape Complexity: 0.64705884 |
| Stereocomplexity: 0.0 | Ligand Type: Small Molecule | |
Binding Affinity |
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| Database Name | Value |
| PDBBind | Kd : 2 nM, Kd : 2 nM |
| Binding MOAD | Kd : 2 nM, Kd : 2 nM |