PDB Entry (2pcp)

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Visualizer: MichelaNGLo

PDB ID: 2pcp Resolution: 2.2 Å Exp. Method: X-RAY DIFFRACTION
PMID: 9786848 DOI: 10.1074/jbc.273.44.28576
Protein
Protein Name: Monoclonal 6B5 Fab
Protein Class: ANTIBODY
Uniprot ID/ACC: - Organism: Mus musculus
Gene Symbol: - Gene ID: -
Pocket Descriptors
Volume: 137.088 Depth: 15.0336
Hydrophobicity: 0.717557 Drug Score: 0.0171002
Pocket Similarity: Calculate
Ligand
Ligand Name:   1-(PHENYL-1-CYCLOHEXYL)PIPERIDINE
HET ID:   1PC PubChem:   6468
DrugBank:   DB03575 ChEMBL:   CHEMBL275528
Canonical SMILES:   C1CCC(CC1)(N1CCCCC1)c1ccccc1
Standard InChI:   InChI=1S/C17H25N/c1-4-10-16(11-5-1)17(12-6-2-7-13-17)18-14-8-3-9-15-18/h1,4-5,10-11H,2-3,6-9,12-15H2
Molecular Formula:   C17H25N Mol. Weight:   243.3871 Heavy Atoms:   18
Charge:   0 Is Chiral:   False logP:   4.2698
HBD:   0 HBA:   1 TPSA:   3.24
#Bonds:   20 #Rotatable Bonds:   2 Shape Complexity:   0.64705884
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
Database Name Value
PDBBind Kd : 2 nM, Kd : 2 nM
Binding MOAD Kd : 2 nM, Kd : 2 nM