PDB Entry (3bcu) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 3bcu | Resolution: 2.03 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: - | DOI: None | |
Protein |
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Protein Name: Glycogen phosphorylase, muscle form | |
Protein Class: TRANSFERASE | |
Uniprot ID/ACC: P00489 (PYGM_RABIT) | Organism: Oryctolagus cuniculus |
Gene Symbol: - | Gene ID: 100008972 |
Pocket Descriptors | |
Volume: 144.704 | Depth: 12.2254 |
Hydrophobicity: 0.752809 | Drug Score: 0.207767 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: THYMIDINE | ||
HET ID: THM | PubChem: 5789 | |
DrugBank: DB04485 | ChEMBL: CHEMBL52609 | |
Canonical SMILES: OC[C@H]1O[C@H](C[C@@H]1O)n1cc(C)c(=O)[nH]c1=O | ||
Standard InChI: InChI=1S/C10H14N2O5/c1-5-3-12(10(16)11-9(5)15)8-2-6(14)7(4-13)17-8/h3,6-8,13-14H,2,4H2,1H3,(H,11,15,16)/t6-,7+,8+/m0/s1 | ||
Molecular Formula: C10H14N2O5 | Mol. Weight: 242.22856 | Heavy Atoms: 17 |
Charge: 0 | Is Chiral: True | logP: -1.5143 |
HBD: 3 | HBA: 6 | TPSA: 104.55 |
#Bonds: 22 | #Rotatable Bonds: 2 | Shape Complexity: 0.6 |
Stereocomplexity: 0.3 | Ligand Type: Small Molecule |
Binding Affinity |
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