PDB Entry (4q7f)

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Visualizer: MichelaNGLo

PDB ID: 4q7f Resolution: 1.98 Å Exp. Method: X-RAY DIFFRACTION
PMID: - DOI: None
Protein
Protein Name: 5' nucleotidase family protein
Protein Class: METAL BINDING PROTEIN
Uniprot ID/ACC: Q2G1L5 (Q2G1L5_STAA8) Organism: Staphylococcus aureus
Gene Symbol: - Gene ID: 3919816
Pocket Descriptors
Volume: 2040.19 Depth: 36.0293
Hydrophobicity: 0.694882 Drug Score: 0.999797
Pocket Similarity: Calculate
Ligand
Ligand Name:   (2R,3S,5R)-5-(6-amino-9H-purin-9-yl)-tetrahydro-2-(hydroxymethyl)furan-3-ol
HET ID:   3D1 PubChem:   13730
DrugBank:   - ChEMBL:   CHEMBL449329
Canonical SMILES:   OC[C@H]1O[C@H](C[C@@H]1O)n1cnc2c1ncnc2N
Standard InChI:   InChI=1S/C10H13N5O3/c11-9-8-10(13-3-12-9)15(4-14-8)7-1-5(17)6(2-16)18-7/h3-7,16-17H,1-2H2,(H2,11,12,13)/t5-,6+,7+/m0/s1
Molecular Formula:   C10H13N5O3 Mol. Weight:   251.24191 Heavy Atoms:   18
Charge:   0 Is Chiral:   True logP:   -0.3696
HBD:   3 HBA:   8 TPSA:   119.31
#Bonds:   23 #Rotatable Bonds:   2 Shape Complexity:   0.5
Stereocomplexity:   0.3 Ligand Type:   Small Molecule
Binding Affinity
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