PDB Entry (5tw3)

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Visualizer: MichelaNGLo

PDB ID: 5tw3 Resolution: 2.85 Å Exp. Method: X-RAY DIFFRACTION
PMID: 28167742 DOI: 10.1124/mol.116.107755
Protein
Protein Name: Gag-Pol polyprotein
Protein Class: VIRAL PROTEIN
Uniprot ID/ACC: P03366 (POL_HV1B1) Organism: Human immunodeficiency virus type 1 group M subtype B
Gene Symbol: - Gene ID: -
Pocket Descriptors
Volume: 930.368 Depth: 40.9465
Hydrophobicity: 0.705051 Drug Score: 0.765313
Pocket Similarity: Calculate
Ligand
Ligand Name:   5-{2-[2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy]-4-fluorophenoxy}-7-fluoronaphthalene-2-carbonitrile
HET ID:   7N1 PubChem:   118006011
DrugBank:   - ChEMBL:   CHEMBL3342991
Canonical SMILES:   N#Cc1ccc2c(c1)cc(cc2Oc1ccc(cc1OCCn1ccc(=O)[nH]c1=O)F)F
Standard InChI:   InChI=1S/C23H15F2N3O4/c24-16-2-4-19(21(11-16)31-8-7-28-6-5-22(29)27-23(28)30)32-20-12-17(25)10-15-9-14(13-26)1-3-18(15)20/h1-6,9-12H,7-8H2,(H,27,29,30)
Molecular Formula:   C23H15F2N3O4 Mol. Weight:   435.3797 Heavy Atoms:   32
Charge:   0 Is Chiral:   False logP:   3.71098
HBD:   1 HBA:   6 TPSA:   97.11
#Bonds:   36 #Rotatable Bonds:   6 Shape Complexity:   0.09090909
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
-