PDB Entry (1rao)

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Visualizer: MichelaNGLo

PDB ID: 1rao Resolution: 1.56 Å Exp. Method: X-RAY DIFFRACTION
PMID: 15016362 DOI: 10.1016/j.str.2004.02.003
Protein
Protein Name: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Protein Class: TRANSFERASE
Uniprot ID/ACC: P26281 (HPPK_ECOLI) Organism: Escherichia coli
Gene Symbol: - Gene ID: 948792
Pocket Descriptors
Volume: 605.824 Depth: 19.4319
Hydrophobicity: 0.696774 Drug Score: 0.440232
Pocket Similarity: Calculate
Ligand
Ligand Name:   6-HYDROXYMETHYLPTERIN-DIPHOSPHATE
HET ID:   HH2 PubChem:   135440058
DrugBank:   DB04047 ChEMBL:   CHEMBL1233314
Canonical SMILES:   Nc1nc2ncc(nc2c(=O)[nH]1)CO[P@@](=O)(OP(=O)(O)O)O
Standard InChI:   InChI=1S/C7H9N5O8P2/c8-7-11-5-4(6(13)12-7)10-3(1-9-5)2-19-22(17,18)20-21(14,15)16/h1H,2H2,(H,17,18)(H2,14,15,16)(H3,8,9,11,12,13)
Molecular Formula:   C7H9N5O8P2 Mol. Weight:   353.1226 Heavy Atoms:   22
Charge:   0 Is Chiral:   False logP:   -0.3972
HBD:   5 HBA:   12 TPSA:   230.46
#Bonds:   24 #Rotatable Bonds:   5 Shape Complexity:   0.14285715
Stereocomplexity:   0.14285715 Ligand Type:   Small Molecule
Binding Affinity
-